DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Ptprs

DIOPT Version :10

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_038938986.1 Gene:Ptprs / 25529 RGDID:3452 Length:1916 Species:Rattus norvegicus


Alignment Length:1509 Identity:339/1509 - (22%)
Similarity:559/1509 - (37%) Gaps:421/1509 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SESQELAEKVEVTVVSTVYTLGFSISNEADYSIDKVICRNGSGSETEANAAHVCENLNPCTFYTS 101
            |:||:...:::..:.:|.|::| .:|..::|.|                             :.|
  Rat   356 SKSQDGPYQIKEDITTTRYSIG-GLSPNSEYEI-----------------------------WVS 390

  Fly   102 VVSFRSNVSGKPPPSDQTIYAYTEYKQPKTTVTSVVA---TANTIKVTWQTNDRACVESFGI--- 160
            .|    |..|:.||| :::...|..:.|.:...:|.|   :|.|:.|.|:..    ||..|:   
  Rat   391 AV----NSIGQGPPS-ESVVTRTGEQAPASAPRNVQARMLSATTMIVQWEEP----VEPNGLIRG 446

  Fly   161 -----TAKATDYTKSFQLLN-DKSSQTFV-NLSACLTHTITLDTRNNASVVVDTDATDVDTQYAE 218
                 |.:......::|..| |.|..|.| :|....|:|:.:....:......:|...|.||...
  Rat   447 YRVYYTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGV 511

  Fly   219 PGDLVMNVTNLASGITMI--TWGDPSEKNCISNYVFKWQRNDCGTDQNQ--DTTT-----DV-PS 273
            ||. .||:...|...|.|  :|..|.:::.| .|...::..|.|.:..:  |.||     |: |:
  Rat   512 PGQ-PMNLRAEAKSETSIGLSWSAPRQESVI-KYELLFREGDRGREVGRTFDPTTAFVVEDLKPN 574

  Fly   274 TETTNEI------------DYVTTTPMETTPDTPSDEVKCEWTDVSSDGKLREYLLTDLQGCDLY 326
            ||....:            ..|....::..|..|..:|||                |.|:     
  Rat   575 TEYAFRLAARSPQGLGAFTAVVRQRTLQAKPSAPPQDVKC----------------TSLR----- 618

  Fly   327 TFQVFINENSTAKASQTFTSAEKLVSAVYEPSPTAYPTQLHWTWFSPQNHPKCVANYSVTL--TG 389
                     |||          .|||  :.|.|             |:.|...:..|||..  .|
  Rat   619 ---------STA----------ILVS--WRPPP-------------PETHNGALVGYSVRYRPLG 649

  Fly   390 PIQRSENKTMNVITEETFAIFDDLDPCGIYLVEIVPNQLNGSAGTKYQEQSTVGEDQPSVIQDP- 453
            .......:..|:....|..:.:.|:....|.|..|          .|.|.....|..|.|::.. 
  Rat   650 SEDPDPKEVNNIPPTTTQILLEALEKWTEYRVTAV----------AYTEVGPGPESSPVVVRTDE 704

  Fly   454 --------VVEAEAY---SMEVSWKTP----EYADLCIDGY-----RLSG--------------- 483
                    .|||||.   ::.|.|::|    ::..  |.||     |:.|               
  Rat   705 DVPSAPPRKVEAEALNATAIRVLWRSPTPGRQHGQ--IRGYQVHYVRMEGAEARGPPRIKDIMLA 767

  Fly   484 ---WMEDDKLVEVEALSITTQNTTVVFDKNLLACQVYIIQIIPYTKENLDGQLRQVGVETKAAIV 545
               |..||          |.:...|:  .||.....|.|.:..||.:....:.:...|.||.|::
  Rat   768 DAQWEMDD----------TAEYEMVI--TNLQPETAYSITVAAYTMKGDGARSKPKVVVTKGAVL 820

  Fly   546 DYTKVKLEMKNAGSEFI-----------DLIAFNADY--NNSCPTIFALFTCNATTQVRNPYAER 597
            ....:.::....||...           .::.:...:  .::.|....|..          :..|
  Rat   821 GRPTLSVQQTPEGSLLARWEPPADAAEDPVLGYRLQFGREDAAPATLELAA----------WERR 875

  Fly   598 YVEGHSKQGFNASLSPLSPYATYVCKVILYNVAGPSEPVVDADMHTTTYFPEQPESVMLEKSTVS 662
            :.            :|....||||.::.....||..|. ..|.:......|.....::.....||
  Rat   876 FA------------APAHKGATYVFRLAARGRAGLGEE-ASAALSIPEDAPRGFPQILGAAGNVS 927

  Fly   663 --SLLFNWQP--PTYTNGPIKYYQAFLMRHEASYFVPADCAIVEQDTKSETKGDPSVNFTGLAPA 723
              |::..|.|  |...||.|..|...:  .||.  .|......|....::...:.::...||.|.
  Rat   928 AGSVILRWLPPVPAERNGAIIKYTVSV--REAG--APGPATETELAAAAQPGAETALTLQGLRPE 988

  Fly   724 VRYMMQVAAQNDFGMGVYTEPVIGITLPAVSDSVTQLTVLTQGPVNNNA--VYEANVTITWKVPC 786
            ..|.::|.|....|.|.::.|   :......|.|:        |.|...  :.:.:|.::|:.|.
  Rat   989 TAYELRVRAHTRRGPGPFSPP---LRYRLARDPVS--------PKNFKVKMIMKTSVLLSWEFPD 1042

  Fly   787 KSNGDIEYFQLAFNGTRNNFAPVSFERRVELDTGNKQGRMSYTETEMQPQFDYTVEVSVKNRDVE 851
            ..|....| ::.:||             :.||...:..:...  |.::|...|...::.:...:.
  Rat  1043 NYNSPTPY-KIQYNG-------------LTLDVDGRTTKKLI--THLKPHTFYNFVLTNRGSSLG 1091

  Fly   852 QLSSSVPG--SWQSPAGLPTI---PSDELIKQMRANVEETSNPTKTAIVRLPADIMTSASGDIKW 911
            .|..:|..  ::...:|.|::   |.::                .:.:|.|| |..:..:....:
  Rat  1092 GLQQTVTARTAFNMLSGKPSVAPKPDND----------------GSIVVYLP-DGQSPVTVQNYF 1139

  Fly   912 MALMISQKNCAGVPHLKYDVSSDWPKVLSYQEAGADGTGDCSLEYQTTEERWHPEPVQ----RQR 972
            :.::..:|:..|          .:|.:|...|       |..||          |.:|    .||
  Rat  1140 IVMVPLRKSRGG----------QFPILLGSPE-------DMDLE----------ELIQDLSRLQR 1177

  Fly   973 RDGEVTSDEEI--------------VFTIGLDKCSEVQKTY---CNGPLLPDTDYNVVV------ 1014
            |....:...|:              ||..|      .||.|   .|..|.|...|.:.|      
  Rat  1178 RSLRHSRQLEVPRPYIAARFSILPAVFHPG------NQKQYGGFDNRGLEPGHRYVLFVLAVLQK 1236

  Fly  1015 --RLFTASGYSDAAVLNFKTKAAI---KVTLILVSVCSCLLLAFVLGLTV---LWVRKRLAWKRD 1071
              ..|.||.:||...|:......|   :..||.| :...|.:.|::.:.:   |:..|..:.::|
  Rat  1237 NEPTFAASPFSDPFQLDNPDPQPIVDGEEGLIWV-IGPVLAVVFIICIVIAILLYKNKPDSKRKD 1300

  Fly  1072 SGQGIEDPFGNVIAKNF---------------------------AIFYTEVAK---------PEK 1100
            |     :|....:..|.                           .|..|::|:         ..|
  Rat  1301 S-----EPRTKCLLNNADLAPHHPKDPVEMRRINFQTPGMLSHPPIPITDMAEHMERLKANDSLK 1360

  Fly  1101 LAREFKEITVVALELSYSASELGCH--KNRYADIFPYDKNRVILD--IDAEGSDYINASFIDGHT 1161
            |::|::.|. ...:.::..|.|..:  |||||::..||.:||||.  ....|||||||:::||:.
  Rat  1361 LSQEYESID-PGQQFTWEHSNLEANKPKNRYANVIAYDHSRVILQPLEGIMGSDYINANYVDGYR 1424

  Fly  1162 RKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYPYNVRG------LTVT 1220
            |:..|||||||.||:..|||||:.:.....:|.:|:..|.:.:||.:|:|.  ||      :.||
  Rat  1425 RQNAYIATQGPLPETFGDFWRMVWEQRSATVVMMTRLEEKSRVKCDQYWPN--RGTETYGFIQVT 1487

  Fly  1221 IKSKEVLELYDRTELTVVHDKYGLKEK--VIHYYFKKWPDHGVPEDPMHLIMFVKKVKAEKRPSY 1283
            :  .:.:||......|....|.|..||  |.|:.|..||||||||.|...:.|:::||....|..
  Rat  1488 L--LDTMELATFCVRTFSLHKNGSSEKREVRHFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPPDA 1550

  Fly  1284 SPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYE 1348
            .|:||||||||||||.||.:|.:::|:::|..::::..|..:|.||..||||:.||:|::....|
  Rat  1551 GPVVVHCSAGVGRTGCFIVIDAMLERIRTEKTVDVYGHVTLMRSQRNYMVQTEDQYSFIHEALLE 1615

  Fly  1349 LV---KHKIPRAAL 1359
            .|   ..::|..:|
  Rat  1616 AVGCGNTEVPARSL 1629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 24/104 (23%)
PTPc 1100..1345 CDD:214550 104/256 (41%)
PtprsXP_038938986.1 I-set 33..124 CDD:400151
Ig strand B 50..54 CDD:409570
Ig strand C 63..67 CDD:409570
Ig strand E 86..93 CDD:409570
Ig strand F 104..109 CDD:409570
Ig strand G 117..120 CDD:409570
IgI_2_RPTP_IIa_LAR_like 137..226 CDD:409400
Ig strand A' 143..147 CDD:409400
Ig strand B 150..159 CDD:409400
Ig strand C 164..170 CDD:409400
Ig strand C' 172..174 CDD:409400
Ig strand D 183..187 CDD:409400
Ig strand E 190..195 CDD:409400
Ig strand F 204..211 CDD:409400
Ig strand G 214..225 CDD:409400
IgI_3_RPTP_IIa_LAR_like 235..316 CDD:409401
Ig strand A 235..237 CDD:409401
Ig strand A' 241..245 CDD:409401
Ig strand B 248..256 CDD:409401
Ig strand C 261..267 CDD:409401
Ig strand C' 269..271 CDD:409401
Ig strand D 274..278 CDD:409401
Ig strand E 283..288 CDD:409401
Ig strand F 295..302 CDD:409401
Ig strand G 306..315 CDD:409401
FN3 309..>711 CDD:442628 94/460 (20%)
FN3 710..815 CDD:238020 25/118 (21%)
FN3 823..899 CDD:214495 12/97 (12%)
FN3 925..1013 CDD:238020 23/94 (24%)
FN3 1018..1101 CDD:238020 17/106 (16%)
R-PTPc-S-1 1338..1619 CDD:350473 109/285 (38%)
R-PTP-S-2 1621..1910 CDD:350475 2/9 (22%)
Blue background indicates that the domain is not in the aligned region.

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