DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Ptprc

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_612516.2 Gene:Ptprc / 24699 RGDID:3451 Length:1273 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550
PTPc 1125..1348 CDD:238006
PtprcNP_612516.2 PTP_N 5..27 CDD:289238
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 45..192
CD45 203..257 CDD:289344
FN3 366..431 CDD:238020
FN3 454..534 CDD:238020
PTPc 621..880 CDD:214550
PTPc 649..880 CDD:238006
Substrate binding. /evidence=ECO:0000250 822..828
PTPc 913..1194 CDD:214550
PTPc 939..1194 CDD:238006
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 960..984
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1219..1273
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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