DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Ptpn1

DIOPT Version :10

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_036769.1 Gene:Ptpn1 / 24697 RGDID:61965 Length:432 Species:Rattus norvegicus


Alignment Length:315 Identity:94/315 - (29%)
Similarity:160/315 - (50%) Gaps:38/315 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1100 KLAREFKEI------TVVALELSYSASELGC---------HKNRYADIFPYDKNRVILDIDAEGS 1149
            ::.:||::|      ..:..::.:.||:..|         ::|||.|:.|:|.:|:  .:..|.:
  Rat     2 EMEKEFEQIDKAGNWAAIYQDIRHEASDFPCRIAKLPKNKNRNRYRDVSPFDHSRI--KLHQEDN 64

  Fly  1150 DYINASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYP--- 1211
            ||||||.|.....::.||.||||.|.:...||.|:.:...|.:|.:.:..|..::||.:|:|   
  Rat    65 DYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRIMEKGSLKCAQYWPQKE 129

  Fly  1212 -----YNVRGLTVTIKSKEVLELYDRTELTVVHDKYGLKEKVIHYYFKKWPDHGVPEDPMHLIMF 1271
                 ::...|.:|:.|::|...|...:|.:.:.......:::|:::..|||.||||.|...:.|
  Rat   130 EKEMVFDDTNLKLTLISEDVKSYYTVRQLELENLATQEAREILHFHYTTWPDFGVPESPASFLNF 194

  Fly  1272 VKKVK--AEKRPSYSPIVVHCSAGVGRTGTFIGLD---LIMQRLKSESKINIFETVKKLRFQRMK 1331
            :.||:  ....|.:.|||||||||:||:|||...|   |:|.:.|..|.::|.:.:.::|..||.
  Rat   195 LFKVRESGSLSPEHGPIVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRRFRMG 259

  Fly  1332 MVQTQQQYTFLYACTYELVKHKIPRAALK--------MDGRPKSVTVPAIPSPKK 1378
            ::||..|..|.|....|..|..:..::::        .|..|....||..|.|.|
  Rat   260 LIQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHEDLEPPPEHVPPPPRPPK 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 85/272 (31%)
Ptpn1NP_036769.1 PTPc-N1 16..292 CDD:350456 84/277 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..322 7/18 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..402
Blue background indicates that the domain is not in the aligned region.

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