DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Ptprj

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_006499054.1 Gene:Ptprj / 19271 MGIID:104574 Length:1351 Species:Mus musculus


Alignment Length:1477 Identity:327/1477 - (22%)
Similarity:548/1477 - (37%) Gaps:439/1477 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LILILWIAGVQGQTVGSLVAVSESQELAEKVEVTVVSTVYTLGFSISNEADYSIDKVICRNGSGS 80
            |:|:|    .|||.:.:..|.:...::...|..|.|...:....|.::|         ||  ..:
Mouse   136 LLLLL----RQGQVLCAGAAPNPIFDIEAVVSPTSVLLTWKHNDSGASE---------CR--IEN 185

  Fly    81 ETEANAAHVCENLNPCTFYTSVVSFRSNVSGKPPPSDQT--IYAYTEYKQPKTTVTSVVATANTI 143
            :.|:|.....:|...|           |::|..|.:..|  |.:.|..:....|:|:        
Mouse   186 KMESNLTFPVKNQTSC-----------NITGLSPGTSYTFSIISVTTNETLNKTITT-------- 231

  Fly   144 KVTWQTNDRACVESFGIT-AKAT----DYTKSFQ-LLNDKSSQTFVNLSACLTHTITLDTRNNAS 202
             ..|..:| ..|.|.|:| |:.|    :.|.|:: |:.:.::.:.||:|.....|      ||:.
Mouse   232 -EPWPVSD-LHVTSVGVTQARLTWSNANGTASYRMLIEELTTHSSVNISGLKPGT------NNSF 288

  Fly   203 VVVDTDATDVDTQYAE--PGDL----VMNVTNLASGITMITWGDPSEKNCISNYVFKWQRNDCGT 261
            ...:::.|..|...||  |.|.    .:.||||:.                             .
Mouse   289 AFPESNETQADFAVAEEVPADANGTKRIPVTNLSQ-----------------------------L 324

  Fly   262 DQNQDTTTDVPSTETTNEIDYVTTTPMETTPDTPSDEVKCEWTDVSSDGKLREYLLTDLQGCDLY 326
            .:|...:.|.||                                 ..|..|.|.|||||:....|
Mouse   325 HKNSLVSVDPPS---------------------------------GQDPSLTEILLTDLKPDTQY 356

  Fly   327 TFQVF---INENSTAKASQTFTSAEKLVSAVYEPSPTAYPTQLHWTWFSPQNHPKCVANYSVTLT 388
            ...::   .|.......::.|.:....||.|...:.:|  :.:..||.|..:..:....|.:.:.
Mouse   357 NATIYSQAANGTEGQPRNKVFKTNSTQVSDVRAMNISA--SSMTLTWKSNYDGSRTSIVYKIHVA 419

  Fly   389 GPIQRSENKTMNVITEETFAIFDDLDPCGIYLVEIVP--NQLNGSAGTKYQEQSTVGEDQPSVIQ 451
            |. ..|.|:|:|    :|.||...|....:|.:.:.|  .|..|:.|..   |.....||.|..:
Mouse   420 GG-THSVNQTVN----KTEAIILGLSSSTLYNITVHPFLGQTEGTPGFL---QVYTSPDQVSDFR 476

  Fly   452 DPVVEAEAYSMEVSWKTPEYADLCIDGYRLSGWMEDDKLVEV--------EALSITTQNTTVVFD 508
              |......::.::|::                 .|.|..|:        :..:.:|.|.:.:.:
Mouse   477 --VTNVSTRAIGLAWRS-----------------NDSKSFEIFIKQDGGEKHRNASTGNQSYMVE 522

  Fly   509 KNLLACQVYIIQIIPYTKENLDGQLRQV-GVETKAAIVDY-------TKVKLEMKNAGSEFIDLI 565
             :|.....|..:|||...:..:|....| |....:|:.|.       |:::||.:|..       
Mouse   523 -DLKPGTSYHFEIIPRGPDGTEGLSSTVNGSTDPSAVTDIRVVNISTTEMQLEWQNTD------- 579

  Fly   566 AFNADYNNSCPTIFALFTCNATTQVRNPYAERYVEGHSKQGFNASLSPLSPYATYVCKVILYNVA 630
                  :.|..|...:....:.:.:|...:::::          ::..|:|..       |||| 
Mouse   580 ------DASGYTYHLVLESKSGSIIRTNSSQKWI----------TVGSLTPGT-------LYNV- 620

  Fly   631 GPSEPVVDADMHTTTYFPE---------------QPESVM-LE-KSTVSSLLFNWQPPTYTNGPI 678
                          |.|||               :|.||. :| .:|.::....|:.....:...
Mouse   621 --------------TIFPEVDQIQGISNSITQYTRPSSVSHIEVNTTTTTAAIRWKNEDAASASY 671

  Fly   679 KYYQAFLMRHEASYFVPADCAIVEQDTKSETKGDPSVNFTGLAPAVRYMMQVAAQNDFGMGV--- 740
            .|....|...:.|           ..|.:.|| |||:....|.|.|.|.:::..|  .|.|.   
Mouse   672 AYSVLILKTGDGS-----------NVTSNFTK-DPSILIPELIPGVSYTVKILTQ--VGDGTTSL 722

  Fly   741 -------YTEPVIGITLPAVSDSVTQL--TVLTQGPVNNNAVYEANVTITWKVPCKSNGDIEYFQ 796
                   .|||          :.||..  .|:.:.|.         :.:.|..|         |.
Mouse   723 VPGWNLFCTEP----------EPVTSFHCEVVPKEPA---------LVLKWACP---------FG 759

  Fly   797 LAFNGTRNNFAPVSFERRVELDTGNKQGRM----SYTETEMQPQFDYTVEVSVKNRDVEQLS--- 854
            : :.|         ||..|..|:.:...|:    |..:||.:.:..|....:..|..:..||   
Mouse   760 M-YTG---------FELGVRSDSWDNMTRLENCTSDDDTECRTEVAYLNFSTSYNISIATLSCGK 814

  Fly   855 SSVPG---------SWQSPAGLPTIP--SDELIKQMRANVEETSNPTKTAIVRLPADIMTSASGD 908
            .::|.         ...:|.|.|.|.  |...:|...:..|.:..|.|...|.|........|.|
Mouse   815 MALPAQNICTTGITDPPTPDGSPNITSVSHNSVKVKFSGFEASHGPIKAYAVILTTGEAAQPSAD 879

  Fly   909 IKWMALMISQKNCAGVPHLKYDVSSDWPKVLSYQE--AGADGTGDCSLEYQT----TEERWHPEP 967
            :                 |||          :|::  .||..|      |.|    .||:...:.
Mouse   880 V-----------------LKY----------TYEDFKRGASDT------YVTYLIRIEEKGQSQG 911

  Fly   968 VQRQRRDGEVTSDEEIV----FTIGLDKCSEVQKTYCNGPLLPDTDYNVVVRLFTASGYS----- 1023
            :      .||.:.|..|    .|:|          |.||.|.|...|...|..||...|:     
Mouse   912 L------SEVLNYEIDVGNQSTTLG----------YYNGRLEPLGSYRACVAGFTNITYNLQNDG 960

  Fly  1024 ----DAAVLNFKT-KAAIKVT----LILVSVCSCLLLAFVL---GLTVLWVRKRLAWKRDSGQGI 1076
                |.:.::|.. ..|:.:.    :|..:|..|:..|..:   |..:.|.:||           
Mouse   961 LINGDESYVSFSPYSEAVFLPQDPGVICGAVFGCIFGALAITAVGGFIFWRKKR----------- 1014

  Fly  1077 EDPFGNVIAKNFAIFYTEVAKPEK-----------------------LAREFKEITVVALELSYS 1118
                  ..|||..:.:::: ||:|                       .|.|::::.::.:.|...
Mouse  1015 ------TDAKNNEVSFSQI-KPKKSKLIRVENFEAYFKKQQADSNCGFAEEYEDLKLIGISLPKY 1072

  Fly  1119 ASELGCH--KNRYADIFPYDKNRVILDIDAEGS-DYINASFIDGHTRKKEYIATQGPKPESVMDF 1180
            .:|:..:  ||||.::.|||.:||.|.:....: |||||:::.|:..||::||||||.|.::.||
Mouse  1073 TAEIAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKKDFIATQGPLPNTLKDF 1137

  Fly  1181 WRMILQYNVRVIVQVTQFREGNTIKCHEYYP----YNVRGLTVTIKSKEVLELYDRTELTVVHDK 1241
            |||:.:.||..||.:|:..|....||.||:|    .:...:||.:.|:.||..:...:..|.:.:
Mouse  1138 WRMVWEKNVYAIVMLTKCVEQGRTKCEEYWPSKQAQDYGDITVAMTSEVVLPEWTIRDFVVKNMQ 1202

  Fly  1242 YGLKEKVIHYYFKKWPDHGVPEDPMHLIMFVKKVK--AEKRPSYSPIVVHCSAGVGRTGTFIGLD 1304
            ......:..::|..|||||||:....||.|...|:  .::.|..|||:||||||||||||||.:|
Mouse  1203 NSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQIPPESPILVHCSAGVGRTGTFIAID 1267

  Fly  1305 LIMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYELVK 1351
            .::.::::|:.::::..|..||..|..||||:.||.||..|..::::
Mouse  1268 RLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVLDIIR 1314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 27/127 (21%)
PTPc 1100..1345 CDD:214550 96/276 (35%)
PTPc 1125..1348 CDD:238006 92/231 (40%)
PtprjXP_006499054.1 fn3 162..222 CDD:365830 17/81 (21%)
fn3 383..460 CDD:365830 21/83 (25%)
FN3 469..553 CDD:238020 18/103 (17%)
FN3 555..622 CDD:214495 15/111 (14%)
FN3 642..721 CDD:238020 22/92 (24%)
PTP_tm 831..1014 CDD:376280 49/231 (21%)
R-PTPc-J 1083..1311 CDD:350463 91/227 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0791
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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