DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Ptpn20

DIOPT Version :10

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_006518791.1 Gene:Ptpn20 / 19256 MGIID:1196295 Length:463 Species:Mus musculus


Alignment Length:466 Identity:130/466 - (27%)
Similarity:200/466 - (42%) Gaps:107/466 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   911 WMALMI-----SQKNCAGVPHL----KYDVSSDWPKVLSYQEAGADGT----GDCSLEYQTTEER 962
            |...:|     :.:|.....||    ||::.  :|:.|   |:..|.|    .|.||     ..|
Mouse    76 WKGKLIFGNKMNSENVKPSHHLSFSDKYELV--YPEPL---ESDTDETVWDVSDRSL-----RNR 130

  Fly   963 WHPEPVQRQRRDGEVTSDEEIVFTIGLDKCSEVQKTYCNGPLLPDTDYNVVVRLFTASGYSDAAV 1027
            |:       ..|.|.....:.|..: |...|.:.|         ||:.:|..:..|........:
Mouse   131 WN-------SMDSETAGPSKTVSPV-LSGSSRLSK---------DTETSVSEKELTQLAQIRPLI 178

  Fly  1028 LNFKTKAAIKVTLILVSVCSCLLLAFVLGLTVLWVRKRLAWKRDSGQGIEDPFGNVIAKNFAIFY 1092
            .|...::|::         .||                                |.:.|      
Mouse   179 FNSSARSAMR---------DCL--------------------------------NTLQK------ 196

  Fly  1093 TEVAKPE-KLAREFKEITVVALELSYSASEL--GCHKNRYADIFPYDKNRVILDIDAEGSDYINA 1154
                |.| .:.|||.|:..:.|...:::...  ...||||.||.|||..||.|   .:..|||||
Mouse   197 ----KEELDIIREFLELEQMTLPDDFNSGNTLQNRDKNRYRDILPYDSTRVPL---GKNKDYINA 254

  Fly  1155 SFID--GHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYPYNVR-- 1215
            |:|.  .|..:..|||||||.||::.|||:|:|:.|..||..:|:..|...|||:.|:|.:::  
Mouse   255 SYIRIVNHEEEYFYIATQGPLPETIEDFWQMVLENNCNVIAMITREIECGVIKCYSYWPISLKEP 319

  Fly  1216 ----GLTVTIKSKEVLELYDRTELTVVHDKYGLKEKVIHYYFKKWPDHGVPEDPMHLIMFVKKVK 1276
                ..:|.:::..|.:.:......:|....|..:.|.|..|.||||||.|......|.:|:.|:
Mouse   320 LEFEHFSVFLETFHVTQYFTVRVFQIVKKSTGKSQCVKHLQFTKWPDHGTPASADFFIKYVRYVR 384

  Fly  1277 AEKRPSYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTF 1341
              |.....|::|||||||||||.||.:|::...::.....:|...|.::|.||..|:||::||.|
Mouse   385 --KSHITGPLLVHCSAGVGRTGVFICVDVVFSAIEKNYSFDIMNIVTQMRKQRCGMIQTKEQYQF 447

  Fly  1342 LYACTYELVKH 1352
            .|....|::::
Mouse   448 CYEIVLEVLQN 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 94/254 (37%)
Ptpn20XP_006518791.1 PTP_DSP_cys 251..457 CDD:475123 77/207 (37%)
Blue background indicates that the domain is not in the aligned region.

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