DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and F36H1.3

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_502058.3 Gene:F36H1.3 / 185379 WormBaseID:WBGene00009492 Length:532 Species:Caenorhabditis elegans


Alignment Length:393 Identity:116/393 - (29%)
Similarity:173/393 - (44%) Gaps:63/393 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1082 NVIAKNFAIFYTEVAK--PEKLAREFKEITVVALELSYSASEL-----GCHKNRYADIFPYDKNR 1139
            :|..:.|..|.|.|..  .:.||:|:.|..|..|.:.|....:     ...||||.|:...||.|
 Worm   102 SVQTEAFETFTTTVTSMGVDGLAKEYLETLVPFLPVGYFERSIFDKNTEFKKNRYKDVPCNDKTR 166

  Fly  1140 VILDIDAEGSDYINASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTI 1204
            |||. |....||::|:::.|  .|..:|.||||..::.||.|||:||..|..|..:.:..|....
 Worm   167 VILK-DGYPGDYVHANYVKG--TKPMFILTQGPLKDTAMDIWRMVLQEGVAAICMLCELIENGRP 228

  Fly  1205 KCHEYYPYNVRG-------LTVTIKSKEVLELYDRTE-LTVVHDKYGLKEKVIHYYFKKWPDHGV 1261
            ||..|:| :..|       :|||.......:.:.:.: |||:..|.|...|:.||....|||..:
 Worm   229 KCEPYFP-DTEGQVLTFGEITVTCTESTTPDNHTQLKMLTVMDKKSGKSHKLYHYKIITWPDKSI 292

  Fly  1262 PEDPMHLIMFVKKVKAEKRPSYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLR 1326
            ....:.::..::.::  |.|  .|||||||||:||||||..:::..|.|.:.......:.|:.:|
 Worm   293 ALSNLAILRTLRSLR--KMP--GPIVVHCSAGIGRTGTFAAIEVGAQCLLNGKAFRPADLVRAVR 353

  Fly  1327 FQRMKMVQTQQQYTFLYACTYELVKHKIPRAALKMDGRPKSVT------------VPAIPSP--- 1376
            ..|:..||...||..|.....:|      ..|.|....|||:.            |.|.|.|   
 Worm   354 HCRLNSVQMDTQYLMLVEAILDL------GVAFKYIEDPKSLDAIETYKRNVADYVEAHPPPLEM 412

  Fly  1377 -----------KKVSFPDVDVGSEYVSSAPITDLDDGRPIVQLPSRFSGLRRNSPPGE---NDNP 1427
                       :|....|.|.|:: .||||: ......|.:..|::   |....||.|   ..:|
 Worm   413 FKAPPKVEIEKEKEKDKDEDDGAQ-PSSAPV-HTPPAPPAIPSPAK---LPTAPPPVEKPVTPSP 472

  Fly  1428 TSS 1430
            ::|
 Worm   473 SAS 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 85/257 (33%)
PTPc 1125..1348 CDD:238006 78/230 (34%)
F36H1.3NP_502058.3 PTPc 122..375 CDD:214550 85/260 (33%)
PTPc 152..375 CDD:238006 78/230 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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