DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and pph-2

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_502251.1 Gene:pph-2 / 178119 WormBaseID:WBGene00004084 Length:430 Species:Caenorhabditis elegans


Alignment Length:419 Identity:105/419 - (25%)
Similarity:168/419 - (40%) Gaps:76/419 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   971 QRRDGEVTSDEEIVFTIGLDKCSEVQKTYCNGPLLPDTDYNVVVRLFTASGYSDAAVLNFKTKAA 1035
            :||:.|...:|:.....|..|..|  ||..:|    ....|||.:...    |.|:|:..|..:.
 Worm    22 KRREPEFRYEEKTAVHGGKTKYEE--KTVVHG----GKTKNVVAKKVP----SKASVIVDKKAST 76

  Fly  1036 IKVTLILVSVCSCLLLAFVLGLTVLWVRKRLAWKRD-----SGQGIEDPF----GNVIAKNFAIF 1091
            .:.|:.:....|.|.::.....||...:::...|:.     ||:.....|    |::   |....
 Worm    77 TETTVPITVKKSLLSISTAYDRTVTEEKEKEKPKKKEKEKWSGEEASIKFVKSLGSI---NLKDE 138

  Fly  1092 YTEVAK-PEKLAREFKEITVVALELSYSASELGCHKNRYADIFPYDKNRVILDIDAEGSDYINAS 1155
            |.|:.| |.:..|       ..:..|:|:      :||:.|...||.||:|:.:..:  ||||.|
 Worm   139 YDEIQKLPVQTER-------CKMWQSHSS------RNRHNDSKCYDHNRIIVQMCKD--DYINGS 188

  Fly  1156 FID-GHTRKKEYIATQGPKPES---VMDFWRMILQ---YNVRVIVQVTQFREG--NTIKCHE--- 1208
            .|: .|.....|: .|.||.:|   |.:|||::..   ..|.:|.:..:....  :.:.|.|   
 Worm   189 KINVPHFTPSIYL-VQLPKMDSVDAVEEFWRVVFHEQCQTVHIIARPEELTNPAIDKLFCQESGA 252

  Fly  1209 -YYPYNVRGLTVTIKSKE-------VLELY-DRTELTVVHDKYGLKEKVIHYYFKK--WPDH-GV 1261
             .|.......|..::.||       |:||. :.....|:...|      :|.|:|.  .||. |.
 Worm   253 WLYANGFFVNTRKVEKKENAKADMFVVELLPEGCSNAVMCSVY------LHTYWKPLFGPDRFGA 311

  Fly  1262 PEDPMHLIMFVKKVKAEKRPSYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLR 1326
            .....|.|       |:.....||.|:....|.||....:.|.::..:|....:..|.|.|:.:|
 Worm   312 QIRAAHQI-------AKNENGNSPTVIASVNGSGRNAALLTLAVVEDQLTRGKEPKISEIVRTIR 369

  Fly  1327 FQRMKMVQTQQQYTFLYACTYELVKHKIP 1355
            .||.:.|.:..||..||..|..|:|.|:|
 Worm   370 EQRPQSVDSYIQYVSLYMATNWLIKTKLP 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 68/268 (25%)
PTPc 1125..1348 CDD:238006 66/246 (27%)
pph-2NP_502251.1 PTPc 135..388 CDD:214550 72/281 (26%)
PTPc 161..388 CDD:304379 65/242 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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