DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and F57H12.5

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_501331.1 Gene:F57H12.5 / 177592 WormBaseID:WBGene00019020 Length:543 Species:Caenorhabditis elegans


Alignment Length:333 Identity:83/333 - (24%)
Similarity:136/333 - (40%) Gaps:54/333 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1062 VRKRLAWKRDSGQGIEDPFGNVIAKNFAIFYTEVAKPEKLAREFKEI-------TVVALELSYSA 1119
            |:|:.: |:.|.|..:...|...|.||.....::   :|:..||..:       |..|.|.:...
 Worm   186 VKKKHS-KKHSKQKTKMWLGMPSALNFCNKNNDI---QKIREEFGFLDSLVCNKTTEAFEANKVR 246

  Fly  1120 SELGCHKNRYADIFPYDKNRVILDIDA-EGSDYINASFI---DGHTR------------------ 1162
            :..||.|       .||:|||.|:... |..:|||||.|   |...|                  
 Worm   247 NREGCPK-------IYDENRVQLNRPGHEDVNYINASVITLTDVCRRMACVPAYVHLVVLYFVIF 304

  Fly  1163 --KKEYIATQGPKPES---VMDFWRMILQYNVRVI-VQVTQFREGNTIKC---HEYYPYNVRGLT 1218
              :.:.|..|.|:.|:   |.|||.||.|..:.:: :.|...:..||...   .|...|...| .
 Worm   305 QFEHKLIVAQLPQMENESFVEDFWYMIYQEQIHLVYLMVPDDKLKNTTTSLFNDENGGYQYTG-K 368

  Fly  1219 VTIKSKEVLELYDRTELTVVHDKYGLKEKVI---HYYFKKWPDHGVPEDPMHLIMFVKKVKAEKR 1280
            :.|.::......|..|.|:.....|..:.||   |:: ..|.....|...:.:|..:.:..:||:
 Worm   369 MFINNRRADVSGDPKEYTIEVLPEGNSDSVICQVHHH-APWKHLQQPPKTLPIIKMIHQFLSEKQ 432

  Fly  1281 PSYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYAC 1345
            ...:.:.|....|.||..:|||....:.:|.:..:.||.|.:|.::.||...|::..||..:||.
 Worm   433 VQNAGVCVVSLFGCGRACSFIGALYAINQLNNGIEPNICEIMKNIKQQRPGGVESFAQYASIYAI 497

  Fly  1346 TYELVKHK 1353
            .::.:..|
 Worm   498 VFDYIARK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 72/285 (25%)
PTPc 1125..1348 CDD:238006 65/256 (25%)
F57H12.5NP_501331.1 PTPc 220..500 CDD:214550 73/288 (25%)
PTPc 255..498 CDD:304379 64/244 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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