DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and C17H12.3

DIOPT Version :10

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001379692.1 Gene:C17H12.3 / 177443 WormBaseID:WBGene00015929 Length:374 Species:Caenorhabditis elegans


Alignment Length:283 Identity:96/283 - (33%)
Similarity:143/283 - (50%) Gaps:28/283 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1099 EKLAREFK--------EITVVALELSYSASELGCHKNRYADIFPYDKNRVILDIDAEGSDYINAS 1155
            |||..||:        ::|..|...:.||: :...||||||:...|:|.|::......|||::|:
 Worm    76 EKLRDEFRQMAKYTRPDMTQNAFNANQSAN-INETKNRYADVPCQDQNIVLVAKPPAPSDYVHAN 139

  Fly  1156 FID-GHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYPYNVRGLTV 1219
            |:. .....|.:|.||||...:|.|||.||:|..|..||.:.:..|....||.:|:|. ..|...
 Worm   140 FVGCPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPL-AMGEKK 203

  Fly  1220 TIKSKEVLELYDRT---------ELTVVHDKYG-LKEKVIHYYFKKWPDHGVPEDPMHLIMFVKK 1274
            .:|...|:|....|         ::|.:...:| .|..|.|.::..|||.|||...:..:..:..
 Worm   204 EVKGGIVVENVSGTKPMDRDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSA 268

  Fly  1275 VKAEKRPSYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKI-NIFETVKKLRFQRMKMVQTQQQ 1338
            |    |.|..|||||||||:|||||.:.::.|::|:....:. .:.:.||.||.||...:||..|
 Worm   269 V----RGSRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMPDLVKSLRDQRAYSIQTDMQ 329

  Fly  1339 YTFLY--ACTYELVKHKIPRAAL 1359
            |.:::  ...|.|.|:|...|||
 Worm   330 YLYIHRVMLNYFLEKYKDKYAAL 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 88/266 (33%)
C17H12.3NP_001379692.1 PTPc 77..339 CDD:214550 88/267 (33%)
Blue background indicates that the domain is not in the aligned region.

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