DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and F20H11.4

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_498458.1 Gene:F20H11.4 / 175937 WormBaseID:WBGene00017647 Length:446 Species:Caenorhabditis elegans


Alignment Length:292 Identity:87/292 - (29%)
Similarity:141/292 - (48%) Gaps:32/292 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1091 FYTEVAKPEKLAREFKEITVVALELSYS--ASELGCH--KNRYADIFPYDKNRVILDIDAEGSDY 1151
            |:.:....:||.|:|     |||....:  |..:..|  |.||.||...|..||:|......:|:
 Worm   111 FFVDELDCKKLMRDF-----VALRAPSTCVADTMKKHSEKCRYYDILCPDATRVVLQNRPPDNDF 170

  Fly  1152 INASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYP----- 1211
            |:|:::. ...|..||:.|||..::|.|||.|:.......:|.:..:.|....||..|.|     
 Worm   171 IHANWMT-MPDKFRYISAQGPMDQTVEDFWHMVYTEKAPAVVMICDWEEDGIQKCSRYIPSEDNI 234

  Fly  1212 YNVRGLTVTIKSKEVLELY-----DRTELTVVHDKYGLKEKVI-HYYFKKWPDHGVPEDPMHLIM 1270
            .:|.|:....|..::..:|     ...|::|..........|: ||:|.||.||..|...:.::.
 Worm   235 SHVCGIYRITKIDQMTMVYADVALQSFEISVTDKSLECPSLVVKHYHFLKWRDHTAPMTSISVLK 299

  Fly  1271 FVKKVKAEKRPSYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQT 1335
            .:|.::..|||  .|.|:|||||:|||.|.||:|...||:....::|:.:.|:::|..|.|.||:
 Worm   300 LLKALRDPKRP--GPPVIHCSAGIGRTATLIGVDYGNQRIGEVGEMNVLDIVREMRQMRDKAVQS 362

  Fly  1336 QQQYTFLYACTYELVKHKIPRAALKMDGRPKS 1367
            ..|:.|:..|..:         .:.:||.|::
 Worm   363 HHQFIFMLMCIAD---------RMVLDGVPQN 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 82/259 (32%)
PTPc 1125..1348 CDD:238006 75/235 (32%)
F20H11.4NP_498458.1 Y_phosphatase 142..375 CDD:278528 75/235 (32%)
PTPc 144..375 CDD:238006 74/233 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.970

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