DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and dep-1

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001254192.1 Gene:dep-1 / 174437 WormBaseID:WBGene00009717 Length:1367 Species:Caenorhabditis elegans


Alignment Length:1519 Identity:325/1519 - (21%)
Similarity:570/1519 - (37%) Gaps:351/1519 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WKQSHRRIHALI---LILWIAGVQGQTVGS------LVAVSES---------------------- 39
            ||.   .:|:||   |:|.::..|..::.:      |.|:.:.                      
 Worm     4 WKY---ELHSLIWLFLVLHLSKCQSDSLTTSAEQHELFAIKKDSLSPWSQILVSLPRRHPLYQSF 65

  Fly    40 ----QELAEKVEVTVVSTVYTLGFSISNEADYSIDKVICRNGSGSETEANAAHVCENLNPCTFYT 100
                |::.|.:...|..:..|  |..|::|.|||.....|.|   ...:.|.|..::.:     |
 Worm    66 AAKIQDVTENISDEVRDSNKT--FVSSDDAPYSIRIHALRAG---HRYSIAIHGQKDGS-----T 120

  Fly   101 SVVSFRSNVSGKPPPSDQTIYAYTEYKQPKTTVTSVVATANTIKVTWQTNDRACVESFGITAKAT 165
            |::...|.|.....|..:::.:..:..:...|:       .|||     ||....:||.|..:..
 Worm   121 SLIKEESVVMDPRAPDFRSMDSDIQVAEHNITM-------RTIK-----NDSYLQDSFSIEYRQI 173

  Fly   166 DYTKSFQLL------NDKSSQTFV-NLSACLTHTITLDTRNNASVVVDTDATD----VDTQYAEP 219
            :..|.|.:|      ..|:.:.:: ||::...:::        .|:...|...    :.|...:|
 Worm   174 NPDKKFPVLQILDIPEQKNLEFYLGNLNSGFDYSV--------RVIAHKDGMSSRPWISTLTTKP 230

  Fly   220 GDL-VMNVTNLASGITMITWGDPSEKNCISNYVFKWQRNDCGTDQNQDTTTDVPSTETT------ 277
            ..| .:|:...|.....::|.: .|.:....|..::...   :..|..|...:||||::      
 Worm   231 SPLKEVNINQNAGSCVEVSWQN-DEFSGADFYTIQYSLQ---STPNNSTNMTIPSTESSISICDS 291

  Fly   278 ----------------NEIDYVTTTPMETTPDTPSDEVKCEWTDVSSDGKLREY-LLTDL-QGCD 324
                            .::.....|..:..|..|.|      ..|.:|.|..:| ||.:| ....
 Worm   292 MLQGEAYQIIATVQKGGQVSEPLITKFQLRPLPPID------FRVRADLKRGKYKLLAELPTSSK 350

  Fly   325 LYTFQVFINENSTAKASQTFTSAEKLVSAVYEPSPTAYPTQLH-WTWFSPQNHPKCVANYSVTLT 388
            :...|:.: ....|:.|..:.:.|:..|.             | ..||:....|....::|::..
 Worm   351 IDKCQITV-AGDEAERSVNYANIEQTKSG-------------HKICWFNFALSPGERFDFSISSM 401

  Fly   389 GPIQRSENKTMNVITEETFAIFDDLDPCGIYLVEIVPNQLNGSAGTKYQEQSTVGEDQPSVIQDP 453
            .....|:....:::....|    |.:..|:.|.|     .||.....: .:|.|...:...|.:.
 Worm   402 ANESASQKLQKSIVLTPAF----DFNAFGLTLQE-----SNGGIELIW-PKSEVFMTRVKDIWNK 456

  Fly   454 VVEAEA-YSMEVSWKTPEYADLCIDGYRLSGWMEDDKLVEVEALSITTQNTTVVFDKNLLACQVY 517
            ||.||: .:|.:   ||           :....|.||.::.|.   :.:|...||.|||:....|
 Worm   457 VVGAESLLNMRI---TP-----------IGNNDETDKTLKFET---SPKNIDPVFAKNLVKGACY 504

  Fly   518 IIQIIPYTKENLDGQLRQVGVETKAAIVDYTKVKLEMKNAGSEFIDLIAFNADYNNSCPTIFALF 582
            .:|:...||..:..:.|.  .||.........|.||.....|..:.:: |:..::::     ::.
 Worm   505 RVQLFTVTKTGIISETRH--NETIRMSSPAVNVSLESVTRSSATLRIV-FSTHHDST-----SIS 561

  Fly   583 TCNATTQVRNPYAERYVEGHS----KQGFNASLSP------LSPYATYVCKVILYNVAGPSE--- 634
            .|.....||:      :.|.|    :....|:.:|      |||:..|.....:...:|.||   
 Worm   562 NCQMHIVVRD------MNGKSVFDKRMQLTATFAPLLNLDGLSPFHKYTVNTQIICGSGSSETPQ 620

  Fly   635 -PVVDADMHTTTYFPEQPESVMLEKSTVS-----SLLFNWQPPTYTNGPIKYYQAFLMRHEASYF 693
             |.....|...::...|.:...::...|.     |::..|.||...||.:.:|...:.:..:...
 Worm   621 CPAATRTMRQLSFSTRQDKPAAVQDLKVEPLNSYSVMLTWLPPALPNGILTHYAVNVTKIGSDET 685

  Fly   694 VPADCAIVEQDTKSETKGDPSVN------FTGLAPAVRYMMQVAAQNDFGMGVYTEPVIGITLPA 752
            ...|..:      |..:.|.:|.      |.|..    |...|.|..:.|.| ...||:    |.
 Worm   686 RTIDVGV------SSNRSDHTVQVVIDELFGGHT----YSFSVRAVTEAGFG-ENSPVV----PT 735

  Fly   753 VSDSVTQLTVLTQGP-VNNNAVYEANVTITWKVPC--KSNGDIEYFQLAFNGTRNNFAPVSFERR 814
            ||..:....|.|..| :...:|...|:.:.:....  ..||:|:.|.:..:.|.   |..|..|.
 Worm   736 VSMPLMAPPVPTVAPMIMKESVGSHNMIVRFPTTMFDNRNGEIKQFAIIVSETT---ADESINRW 797

  Fly   815 VELDTGNKQGRMSYTETEMQPQFDYTVEVSVKNRDVEQLSSSVPGSWQSPAGLPTIPSDELIKQM 879
            :|.|.|      :||..::| :||.......|.:|::::...|..|.....|     .||...::
 Worm   798 IESDNG------TYTWQQVQ-RFDVWPSYVAKLQDIQKVKQDVDVSIFEELG-----EDETCLEV 850

  Fly   880 RANVEETSNPTKTAI-----VRL-----------PADIMTSASG-------DIKWMALMISQKNC 921
            ||: ...:.|.::|.     :||           |:.:||:.|.       .:..:.::|:....
 Worm   851 RAD-RICNGPLRSASKYRVRIRLFTSPTLFTDSPPSQVMTTGSATPAIPLLTVVAVLIVIAFVGI 914

  Fly   922 AGVPHLKYDVSSDWPKVLSYQEAGADGTGDCSLEYQTTEERWHPEPVQRQRRDGEVTSDEEIVFT 986
            .|...|.:     |.:....:.|.|......|.|   .|.:|....:....|..:..:      .
 Worm   915 VGTIFLFF-----WNRTKKARLAAAAFKNGPSKE---KESQWEALKMMMAERAADCLA------K 965

  Fly   987 IGLDKCS--EVQKTYCNGP-----LLPDTDYNVVVRLFTASGYSDAAVLNFKTKAAIKVTLILVS 1044
            :|||..:  ....|..|.|     .:.|...|..:....|.|:.....|..:|            
 Worm   966 LGLDATTPPPSSTTSSNSPTSTSTTMTDCGSNPHLGAPNAGGHRRTRSLRERT------------ 1018

  Fly  1045 VCSCLLLAFVLGLTVLWVRKRLAWKRDSGQGIEDPFGNVIA------------KNFA--IFYTEV 1095
                            .|..||. :..||.....|...|:.            ::||  :.....
 Worm  1019 ----------------GVEHRLE-RLSSGPVHRTPLYTVVTGANTNKSRPVRIEDFADHVRLMSA 1066

  Fly  1096 AKPEKLAREFKEITVVALELSYSASELGCH--KNRYADIFPYDKNRVILD--IDAEGSDYINASF 1156
            ....:.:.|:..:..|.:..|.:||||..:  |||:.:|..||.:||.|.  .:.||.|||||::
 Worm  1067 DSDFRFSEEYDMMRNVGVGQSVAASELPINRPKNRFTNIPSYDHSRVKLSNPNNIEGGDYINANY 1131

  Fly  1157 IDGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYPYNVRGLTVTI 1221
            :.|.:.::|:||.|||.|.:...||:|..:.....|:.:|:..|....|||:|:|          
 Worm  1132 VPGFSSRREFIAAQGPLPTTRDHFWQMTWEQQCPAIIALTKCVEKGRDKCHQYWP---------- 1186

  Fly  1222 KSKEVLELYDRTELTVV----HDKYGLK----EK----------VIHYYFKKWPDHGVPEDPMHL 1268
            ..:.|..||...|:|:|    .|::.::    ||          |.|:::..|||.|.|..|..:
 Worm  1187 DHENVPVLYGDIEVTIVAEKEFDEFVIRDIRLEKSGPDGRVTRFVRHWHYMAWPDFGAPSHPNGI 1251

  Fly  1269 IMFVKKVK--AEKRPSYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMK 1331
            |.|.:..:  ....|..:|.:|||||||||:||||.:|.::|.......|::|.||.::|::|.:
 Worm  1252 IQFSRMFRHHLPHSPHNAPTIVHCSAGVGRSGTFISIDRLLQSSSFGDPIDVFGTVCEMRYERCQ 1316

  Fly  1332 MVQTQQQYTFLYACTYELVKHKIP 1355
            |||.:|||.|::.|..::::...|
 Worm  1317 MVQNEQQYIFIHYCILQVLQGSSP 1340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 22/111 (20%)
PTPc 1100..1345 CDD:214550 91/268 (34%)
PTPc 1125..1348 CDD:238006 85/246 (35%)
dep-1NP_001254192.1 FN3 640..736 CDD:238020 22/110 (20%)
PTPc 1072..1333 CDD:214550 92/270 (34%)
PTPc 1098..1333 CDD:238006 85/244 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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