DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and C55B7.3

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001367695.1 Gene:C55B7.3 / 172359 WormBaseID:WBGene00016942 Length:346 Species:Caenorhabditis elegans


Alignment Length:290 Identity:96/290 - (33%)
Similarity:137/290 - (47%) Gaps:51/290 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1074 QGIEDPFGNVIAKNFAIFYTEVAKPEKLAREFKEITVVALELSYSASELGCHKNRYADIFPYDKN 1138
            ||:...|  |..:.|..|       ||: :.|||           |.|.|  ||||.|:...|.|
 Worm    54 QGLRAEF--VGMRRFNDF-------EKM-KAFKE-----------AQEAG--KNRYKDVGCLDNN 95

  Fly  1139 RVILDIDAEG---SDYINASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFRE 1200
            ||.|    ||   .:||:|:::...|..|.:|.||.|..::..|||.|..|..|..|..:....|
 Worm    96 RVKL----EGPWPHEYIHANYVATPTNPKRFICTQAPLEKTCADFWYMCYQDKVEYIFMLCNLLE 156

  Fly  1201 GNTIKCHEYYP--------YNVRGLTVTIKSKEVLELYDR-------TELTVVHDKYGLK-EKVI 1249
            ....||.||:|        :...|..:::|.:..:....|       |...:|.:..|.| .|..
 Worm   157 KGARKCFEYFPSKKGDVMDFEEGGQKISVKCESSVTYSFRSDAKANVTATEIVIEGPGEKTRKTT 221

  Fly  1250 HYYFKKWPDHGVPEDPMHLIMFVKKVKAEKRPSYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSES 1314
            ||::..|||.|||...|.::..::..    |||..|||||||||:||||:.:.|:.||.:|.:..
 Worm   222 HYHWNDWPDRGVPAADMAVLELLENA----RPSKGPIVVHCSAGIGRTGSVVMLEYIMDQLLAGQ 282

  Fly  1315 KINIFETV-KKLRFQRMKMVQTQQQYTFLY 1343
            .|:..|.: .|:|.||...:||..||.|::
 Worm   283 IIDDGEKILVKIREQRNNSIQTDAQYLFVH 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 89/264 (34%)
PTPc 1125..1348 CDD:238006 82/239 (34%)
C55B7.3NP_001367695.1 Y_phosphatase 83..317 CDD:395053 82/238 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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