DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp52F and F47B3.1

DIOPT Version :10

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_491278.1 Gene:F47B3.1 / 171984 WormBaseID:WBGene00018525 Length:363 Species:Caenorhabditis elegans


Alignment Length:315 Identity:90/315 - (28%)
Similarity:155/315 - (49%) Gaps:48/315 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1061 WVRKRLAWKRDSG-QGIEDPFGNVIAKNFAIFYTEVAKPEKLAREFKEITVVALELSYSASELGC 1124
            ||::.|    |.| |.:.|.| .|:||     :|    ||.:..|           ::||:   .
 Worm    58 WVQRTL----DMGVQALVDEF-RVLAK-----WT----PEGMTTE-----------AFSAN---T 94

  Fly  1125 HKNRYADIFPYDKNRVILDIDAEGSDYINASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYNV 1189
            .||||.|:...||.|:::......||||:|:::...|..|::|..|||...:...||.|.:|..|
 Worm    95 DKNRYQDVPCQDKGRIVVKFPGLASDYIHANYLGTATNPKKFICAQGPLENTQHSFWAMAIQEKV 159

  Fly  1190 RVIVQVTQFREGNTIKCHEYYP--------YNVRGLTVTIK---SKEVLELYDRTELTVVHDKYG 1243
            ..::.:....|...||||:|:|        :.....|:::.   :|::........:|.:...:|
 Worm   160 ECVIMLCNCIETGKIKCHQYWPLEQGQKLVFGEAPNTISVANLGAKKMAPDEQCINVTTLKVDWG 224

  Fly  1244 LKEKVI-HYYFKKWPDHGVPEDPMHLIMFVKKVKAEKRPSYSPIVVHCSAGVGRTGTFIGLDLIM 1307
            ...:.| |..::.|||.|||:..:..|    .:.:..|.:.:||:||||||:|||||.:.:..:.
 Worm   225 QGSRTIQHLQWENWPDRGVPQTNLTAI----NLLSATRGNQNPILVHCSAGIGRTGTIVAIAYVQ 285

  Fly  1308 QRLKS-ESKINIFETVKKLRFQRMKMVQTQQQYTFLY--ACTYELVKHKIPRAAL 1359
            .::.: |:.:.:.|.:|:||..|...:|.:.||.:|:  ..:|.|.::|...|.|
 Worm   286 DKMMAGENCMAMNELIKELRSHRPWSIQNEFQYLYLHRVLLSYFLERYKETYAEL 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 71/259 (27%)
F47B3.1NP_491278.1 Y_phosphatase 93..326 CDD:459674 68/239 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.