DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Y48G1C.5

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_490668.4 Gene:Y48G1C.5 / 171595 WormBaseID:WBGene00021678 Length:1161 Species:Caenorhabditis elegans


Alignment Length:1403 Identity:253/1403 - (18%)
Similarity:461/1403 - (32%) Gaps:483/1403 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 QELAEKVEVTVVSTVYTLGFSISNEADYSIDKVICRNGSGSETEANA-----AHVCENLNPCTFY 99
            |||.:.   |:.|...||...   :.|:|:|::...:.|..|::..|     :::.:::....|:
 Worm    69 QELTKG---TIPSMNLTLDLF---KYDFSMDQLNAIDYSSLESKLIALKELQSNIGDDVEADQFF 127

  Fly   100 T---SVVSFRSNVSGKPPPSDQTIYAYTEYKQPKTTVTSVVATANTI--KVTWQTNDRACVESFG 159
            |   |||....::.......|:     |.:|.....:|...::..|:  |::..:|....:|:| 
 Worm   128 TTVKSVVHVAHDIGDLKKWPDE-----TNFKADMKDITDSFSSVTTLSEKLSVWSNSYTEIEAF- 186

  Fly   160 ITAKATDYTKSFQLLND--KSSQTFVNLSACLTHTITL-DTRNNASVVVDTDATDVDTQYAEPGD 221
              ...||..||...|||  |.||.|:|:..  ...||| ..:||.|      |......:.:..|
 Worm   187 --TSFTDIPKSHSALNDLLKKSQDFLNIVE--NPKITLHGFKNNNS------AASFFVLWPKVRD 241

  Fly   222 LVMN------VTNLASGITMITWGDPSEKNCISNYVFKWQRNDCGTDQNQDTTTDVPSTETTNEI 280
             |||      :.::..|:..:.....|.:|..               .||::...:.:.|:..: 
 Worm   242 -VMNFISSFKIVDINRGLRKLEEHMASIRNAF---------------PNQESKIHLQTIESIGQ- 289

  Fly   281 DYVTTTPMETTPDTPSDEVKCEWTDVSSDGKLREYLLTDLQGCDLYTFQVFINENSTA-KASQTF 344
               :....:.|...|:..:     |:   |.|...|.||....:.....:|:.|..|. ...:..
 Worm   290 ---SLRTKKYTVGLPNGAI-----DI---GALNSQLATDAWARETTDHMIFLRELETIWLLGEEV 343

  Fly   345 TSAEKLVSAVYEPSPTAYPTQLHWTWFSPQNHPKCVANYSVTLTGPIQRSENKTMNVITEETFAI 409
            .:.|:|               |....||..:.          |...|:|.:.:::||:.:|...|
 Worm   344 RNVERL---------------LRKDRFSTISQ----------LFNTIERLDIQSLNVLVDEAKVI 383

  Fly   410 FDDLDPCGIYLVEIVPNQLNGSAGTKYQEQSTVG-------EDQPSV---IQDPVVEAEAYSMEV 464
            ..    |....:...|:      .|..:|.|.:.       |...|:   :.:.:||:::...||
 Worm   384 AQ----CAKSTLTTAPD------FTNLEELSKIASNIDTELEQSKSILKSVMNQLVESKSGHAEV 438

  Fly   465 ----------SWKTPEYADLCIDGYRLSGWMEDDKLVEVEALSIT----TQNTTVVFDKNLLACQ 515
                      :|.|   |:.|.:|.:           ::..||:|    |.|.|.: :.|||   
 Worm   439 LTVCKDMNNSNWTT---AEPCFNGVK-----------KMTGLSLTMSRMTANATFL-NPNLL--- 485

  Fly   516 VYIIQIIPYTKENLDGQLRQVGVETKAAIVDYTKV------KLEMKNAGSEFIDLIAFNADYNNS 574
                       :.|:.:..:...::::.|..:..|      ..|:........||.:|.||  ..
 Worm   486 -----------KTLEKRAIEKINDSRSDIAQFLDVLSCLQSNKELDKIQKNLSDLNSFRAD--QK 537

  Fly   575 CPTIFALFTCNATTQVRNPYAERYVEGHSKQGFNASLSPLSPYATYVCKVILYNVAGPSEPVVDA 639
            .|.|        .|.|.:...       |....|:.|..|:.|.:...|.    .:..:....:|
 Worm   538 FPPI--------VTAVEDALI-------SVSSLNSGLKSLALYFSKRRKF----ASDKTSQFPNA 583

  Fly   640 DMHTTTYFP-----EQPESVMLEKSTVSSLLFNWQPPTYTNGPIKYYQAFLMRHEASYFVPADCA 699
            ..||.:..|     .:.|.|:.|::.|..              ||.:...:.|..|     |..|
 Worm   584 AEHTNSIGPAAQEIARLEDVLRERANVDI--------------IKNHAQIVQRELA-----ASGA 629

  Fly   700 IVEQDTKSETKGDPSVNFTGLAPAVRYMMQVAAQNDFGMGVYTEPVIGITLPAVSDSVTQLTVLT 764
            .:.||.|..               :..::.:.|..|         |:.:.|.|            
 Worm   630 TLAQDDKDN---------------LEKLVALGASLD---------VMFVQLDA------------ 658

  Fly   765 QGPVNNNAVYEANVTITWKVPCKSNGD---IEYFQLAFNGTRNNFAPV--------SFERRVEL- 817
                             ||...|.:..   ::|..:.....:.::|.:        |.|:.||| 
 Worm   659 -----------------WKSGIKKSDSTKFVDYGYVFTEAKKVDWANLGGLMGLEKSLEKLVELV 706

  Fly   818 -DTGNKQGRMSYTETEMQPQFDYTVEVSVKNRDVEQLSSSVPGSWQSPAGLPTIPSDELIKQMRA 881
             |.|||:   |..|          |:.::|:.|...|..|   |:|:..       ||..|.:.|
 Worm   707 KDVGNKK---SLGE----------VQDALKSLDDGGLEFS---SFQNRL-------DEPKKALAA 748

  Fly   882 NVEETSN---PTKTAIVRLPADIMTS--------ASGDIKWMALMISQKNCAGVPHLKYDVSSDW 935
            .....||   |..|||:. |.|:..|        ..|....:||::....||.:.:  :.::.:.
 Worm   749 LDLFFSNLFKPLPTAILP-PPDLGNSEKNGPPPQTHGQYVILALIVIVIICAIIAY--FCLTPNG 810

  Fly   936 PKVLSYQEAGADGTGDCSLEYQTTEERWHPEPVQRQRRDGEVTSDEEIVFTIGLD---------K 991
            .|:|..:|                :|:.:|......|.|...|.....:.|....         .
 Worm   811 YKILDSEE----------------KEKLYPPNQMISRVDVNETRFSNFLKTFNTQISDFVTRKRN 859

  Fly   992 CSEVQKTYCNGPLLPDTDYNVVVRLFTASGYSDAAVLNFKTKAAIKVTLILVSVCSCLLLAFVLG 1056
            |:.|.:...|...:...|:.....|...:.                        |.|..:::   
 Worm   860 CTSVFENVPNNLEITGDDFAQFCGLQGGNH------------------------CQCDPVSY--- 897

  Fly  1057 LTVLWVRKRLAWKRDSGQGIEDPFGNVIAKNFAIFYTEVAKPEKLAREFKEITVVALELSYSASE 1121
                      ...:.:|||   ...:|:..:..:.:..:..|:                      
 Worm   898 ----------ESSKKNGQG---ESSHVVELDNGLKFVLMPAPQ---------------------- 927

  Fly  1122 LGCHKNRYADIFPYDKNRVILDIDAEGSDYINASFIDGHTRKKEYIATQGPKPESVMDFWRMILQ 1186
                                |.:|.:.||.:                       ::..||..:..
 Worm   928 --------------------LPVDKKSSDIL-----------------------AIAAFWESVKL 949

  Fly  1187 YNVRVIVQVTQFRE------GNTIKCHEYYPYN------VRGLTVT---------IKSKEVLELY 1230
            .....||.:..|.|      .|.:.|..|:|..      :..||:|         :|::::|   
 Worm   950 NKPSTIVMLCDFAEIDHFIGANKVNCDRYFPTELDEKLILADLTITCTKSISKPLLKTRQLL--- 1011

  Fly  1231 DRTELTVVHDKYGLK--EKVIHYYFKKWPDHGVPEDPMHLIMFVKKVKAEKRPSYSPIVVHCSAG 1293
                ||     :|.|  ::|.||.:..||:|..|:|...:...:|.|...:|    |:.|.|:.|
 Worm  1012 ----LT-----FGKKRTQEVTHYQYTGWPEHMGPKDAEEIRYLLKLVTDSER----PVFVVCNTG 1063

  Fly  1294 VGRTGTFIGLDLIMQRLKSE--SKINIFETVKKLRFQR 1329
            .||:..|:.::.:.|.:.:.  .:||....:::.|.:|
 Worm  1064 GGRSAAFVLIESLFQAINTSETGEINYRSLIEQTRSKR 1101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 17/105 (16%)
PTPc 1100..1345 CDD:214550 46/255 (18%)
PTPc 1125..1348 CDD:238006 46/230 (20%)
Y48G1C.5NP_490668.4 WSN 47..111 CDD:280385 13/47 (28%)
PTPc <940..1085 CDD:304379 38/160 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

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