DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Ptpn6

DIOPT Version :10

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001071173.1 Gene:Ptpn6 / 15170 MGIID:96055 Length:597 Species:Mus musculus


Alignment Length:245 Identity:95/245 - (38%)
Similarity:137/245 - (55%) Gaps:19/245 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1126 KNRYADIFPYDKNRVIL---DIDAEGSDYINASFIDGH-----TRKKEYIATQGPKPESVMDFWR 1182
            ||||.:|.|:|.:||||   |.:..|||||||:::...     ...|.|||:||....:|.|||:
Mouse   275 KNRYKNILPFDHSRVILQGRDSNIPGSDYINANYVKNQLLGPDENSKTYIASQGCLDATVNDFWQ 339

  Fly  1183 MILQYNVRVIVQVTQFREGNTIKCHEYYP----YNVRGLTVTIKSKE--VLELYDRTELTVVHDK 1241
            |..|.|.||||..|:..|....||..|:|    ..|.||.....|:|  ..|...||......|.
Mouse   340 MAWQENTRVIVMTTREVEKGRNKCVPYWPEVGTQRVYGLYSVTNSREHDTAEYKLRTLQISPLDN 404

  Fly  1242 YGLKEKVIHYYFKKWPDHGVPEDPMHLIMFVKKV--KAEKRPSYSPIVVHCSAGVGRTGTFIGLD 1304
            ..|..::.||.:..|||||||.:|..::.|:.::  :.|..|...||:||||||:|||||.|.:|
Mouse   405 GDLVREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVID 469

  Fly  1305 LIMQRLKS---ESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYELVK 1351
            ::|:.:.:   :..|:|.:|::.:|.||..||||:.||.|:|....:.::
Mouse   470 MLMESISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIE 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 95/237 (40%)
Ptpn6NP_001071173.1 SH2_N-SH2_SHP_like 6..103 CDD:198203
SH2_C-SH2_SHP_like 111..217 CDD:198185
PTPc-N6 255..520 CDD:350454 95/245 (39%)
Blue background indicates that the domain is not in the aligned region.

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