DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Ptpre

DIOPT Version :10

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_038964618.1 Gene:Ptpre / 114767 RGDID:620771 Length:719 Species:Rattus norvegicus


Alignment Length:70 Identity:17/70 - (24%)
Similarity:29/70 - (41%) Gaps:10/70 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 WGVP-TAKCAVVTDGSTITVKNCTQGVDNPYM--AAPATHPQYGQKWQEKKGEETTKLPASGPGV 450
            ||.. |...|.:|:.....:|.|.:.::...|  .......|..|:.||:.|:.:..|       
  Rat   224 WGDNLTELLAKITNTEVDVLKACQEQIERVLMNNLREGRRQQQKQQQQEQGGQRSKAL------- 281

  Fly   451 DEEDQ 455
            |::||
  Rat   282 DDQDQ 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550
PtpreXP_038964618.1 R-PTPc-E-1 184..412 CDD:350468 17/70 (24%)
PTP_DSP_cys 499..708 CDD:475123
Blue background indicates that the domain is not in the aligned region.

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