DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and si:ch1073-391i24.1

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_021322118.1 Gene:si:ch1073-391i24.1 / 101886250 ZFINID:ZDB-GENE-110408-69 Length:315 Species:Danio rerio


Alignment Length:243 Identity:66/243 - (27%)
Similarity:104/243 - (42%) Gaps:46/243 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1101 LAREFKEITVVALELSYSASELGC-----HKNRYADIFPYDK-NRVILDIDAEGSDYINASFIDG 1159
            :..||:.:.:|...|......:..     .|||..|:.|.|: ...::.||.|.|:||||:.:|.
Zfish    76 IKEEFRTLNMVTPTLRVEDCSIALLPRNHEKNRCMDVLPPDRCLPFLITIDGESSNYINAALMDS 140

  Fly  1160 HTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYPYNVRGLTVTIKSK 1224
            :.:...:|.||.|.|.:|.||||::|.|:...||.:      |.:...:..|             
Zfish   141 YKQPSAFIVTQHPLPNTVKDFWRLVLDYHCTSIVML------NDVDPAQMQP------------- 186

  Fly  1225 EVLELYDRTELTVVHDKYGLKEKVIHYYFKKWP---DHGVPEDP-MHLIMFVKKVKAEKRPSYSP 1285
                          .|.|.:   |..:.|..||   |..|.:.. :.||..|.|.:.|.......
Zfish   187 --------------QDGYRM---VQQFQFLGWPMYRDTPVSKRSFLKLIHQVDKWQEEYDGGEGR 234

  Fly  1286 IVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMV 1333
            .||||..|.||:|||..:.::.:.|:.:..:::|..||.||..:..||
Zfish   235 TVVHCLNGGGRSGTFCAISIVSEMLRHQRSVDVFHAVKTLRNNKPNMV 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 66/243 (27%)
PTPc 1125..1348 CDD:238006 62/214 (29%)
si:ch1073-391i24.1XP_021322118.1 Y_phosphatase <1..43 CDD:332578
PTPc 76..292 CDD:214550 66/243 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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