DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and ptprjb.1

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_017209718.2 Gene:ptprjb.1 / 101883510 ZFINID:ZDB-GENE-090304-1 Length:1104 Species:Danio rerio


Alignment Length:1409 Identity:296/1409 - (21%)
Similarity:459/1409 - (32%) Gaps:483/1409 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ATNWKQSHRRIHALILILWIAGVQGQTVGSLVAVSESQE-------------LAEKVEVTVVSTV 54
            :.|..:|...:|              |..:..|.|.|.|             .:...|.|..||.
Zfish    95 SANTSESQTTLH--------------TTATATAHSSSTEPTTLTTSAPPASTSSSTTETTTTSTT 145

  Fly    55 YTLGFSISNEADYSIDKVICRNGSGSETEANAAHVCENLNPCTFYTSVVSFRSNVSGKPPPSDQT 119
            .:...|.:.|:..:...........|.||:..:         |..||.|...|:.:.....:..|
Zfish   146 PSTSTSTTTESQTTTHMTAISTTHFSSTESTTS---------TAPTSPVFTSSSTTETQTTTPTT 201

  Fly   120 IYAYTEYKQPKT---TVTSVVATANTIKVTWQTNDRACVESFGITAKATDYTKSFQLLNDKSSQT 181
            ..|.|......|   |.||.:.|:.:...|..|...|.|    .|..::..|.:|.:.:..:|. 
Zfish   202 GTATTHSSSTSTQSQTSTSTLPTSTSSSTTETTTPLASV----TTHSSSTQTSTFPITSASTSS- 261

  Fly   182 FVNLSACLTHT--ITLDTRNNASVVVDTDATD---VDTQYAEPGDLVMNVTNLASGITMITWGDP 241
                |...|||  .||.|..:..:...|.|||   ..:|.:.|...|...|:...        .|
Zfish   262 ----STNETHTTPTTLSTSASTPITSHTTATDSSSTGSQTSTPSTTVTTHTSSTE--------SP 314

  Fly   242 SEKNCISNYVFKWQRNDCGTDQNQDTTTDVPSTETTNEIDYVTTTPMETTPDTPSDEVKCEWTDV 306
            :..:..|:           |.....||:...:..:|:..||.:|....:||.:.|..:....|..
Zfish   315 TSTSSTSH-----------TSTGSSTTSQTTAYSSTDTTDYTSTDSQTSTPTSTSHTITSSHTTQ 368

  Fly   307 SSDGKLREYLLTDLQGCDLYTFQVFINENSTAKASQTFTSAEKLVSAVYEPSPTAYPTQLHWTWF 371
            |:.....|                 ..::||..:..|.||.....|.   .:.|:..||   |..
Zfish   369 STGPTSTE-----------------TTDSSTQTSGSTQTSGSTQTSG---STQTSGSTQ---TSS 410

  Fly   372 SPQNHPKCVANYSVTLTGPIQRSENKTMNVITEETFAIFDDLDPCGIYLVEIVPNQLNGSAGTKY 436
            |.|.......:.|...:...|.|.:...:..|:.:.:|                 |.:|||.|..
Zfish   411 STQTSGSTQTSGSTQTSSSTQTSSSTQTSGSTQTSGSI-----------------QTSGSAQTSG 458

  Fly   437 QEQSTVGEDQPSVIQDPVVEAEAYSMEVSWKTPEYADLCIDGYRLSGWMEDDKLVEVEALSITTQ 501
            ..| |.|..|.|           .|.:.|..|           :.||             |..|.
Zfish   459 STQ-TSGSTQTS-----------GSTQTSGST-----------QTSG-------------STQTS 487

  Fly   502 NTTVVFDKNLLACQVYIIQIIPYTKENLDGQLRQVGVETKAAIVDYTKVKLEMKNAGSEFIDLIA 566
            .:|                              |..|.:.|....||.   .|.::.|.    ..
Zfish   488 GST------------------------------QTSVSSTATATTYTP---PMPSSASS----TT 515

  Fly   567 FNADYNNSCPTIFALFTCNATTQVRNPYAERYVEGHSKQGFNASLSPLSPYATYVCKVILYNVAG 631
            |.....::..|..|..|..:||.                      :|.:...|..........:.
Zfish   516 FTTHTPSTVSTTSASTTATSTTH----------------------TPTTVSTTSASTTAATTDSN 558

  Fly   632 PSEPVVDADMHTTTYFPEQPESVMLEKSTVSSLLFNWQPPTYTNGPIKYYQAFLMRHEASYFVPA 696
            .:.|       |||..|:......:...|.||:...||                           
Zfish   559 QTSP-------TTTPKPDLNWKFTVSDITTSSVNLTWQ--------------------------- 589

  Fly   697 DCAIVEQDTK----SETKGDPSVN----------FTGLAPAVRYMMQVAAQNDFGMGVYTEPVI- 746
               .:::||.    :.|.|....|          .|.||..|.|...:.|.|.  :.|.::||. 
Zfish   590 ---AIDKDTAYYKLNWTDGGTQRNGTNTTALFYWVTNLAAGVNYTFCITAVNQ--LSVESDPVCI 649

  Fly   747 -GITLPAVSDSVTQLTVLTQGPVNNNAVYEANVTITWKVPCKSNGDIEYFQLAFNGTRNNFAPVS 810
             ..|.|.|..::|...|.|           ::||:.|..|   :|.|:|:.:             
Zfish   650 SSFTKPNVVSNLTASKVTT-----------SSVTLHWNAP---SGPIDYYLV------------- 687

  Fly   811 FERRVELDTGNKQGRMSYTETEMQPQFDYTVEVSVKNRDVEQLSSSVPGSWQSPAGLPTIPSDEL 875
             |..|:..|..:.....|..|::.|...|.:.|           |:|.|..:|.....|:.:|  
Zfish   688 -EWSVQRSTDRRTNETFYVITDLMPATKYEIHV-----------SAVTGGIKSELVFLTVLTD-- 738

  Fly   876 IKQMRANVEETSNPTKTAIVRLPADIMTSASGDIKWMALMI-------SQKNCAGVP-HLKYDVS 932
                   ||  :.||.|....:...|:.:....|..:.|.:       |:|....:| |:..|.:
Zfish   739 -------VE--AGPTSTNNTGMIVGIVLTLICLIAAIILFVFFYSRRQSKKQYPDIPVHMIRDQT 794

  Fly   933 SDWPKVLSYQEAGADGTGDCSLEYQTTEERWHPEPVQRQRRDGEVTSDEEIVFTIGLDKCSEVQK 997
            .:..||..|:|                                                      
Zfish   795 KNALKVEDYEE------------------------------------------------------ 805

  Fly   998 TYCNGPLLPDTDYNVVVRLFTASGYSDAAVLNFKTKAAIKVTLILVSVCSCLLLAFVLGLTVLWV 1062
                                           .||..:|                           
Zfish   806 -------------------------------YFKRNSA--------------------------- 812

  Fly  1063 RKRLAWKRDSGQGIEDPFGNVIAKNFAIFYTEVAKPEKLAREFKEITVVALELSYSASELGCH-- 1125
                    ||..|                         .|.|::|:..|..:.| .|:.|...  
Zfish   813 --------DSNCG-------------------------FAEEYEELKSVGTQQS-KAAALAIENK 843

  Fly  1126 -KNRYADIFPYDKNRVILDI-DAEGSDYINASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYN 1188
             ||||:::.|||.:||.|.: .:...|||||:.:.|:..:||:||.|||.|.::.:|||||.:.|
Zfish   844 AKNRYSNVLPYDASRVKLSMCGSPFDDYINANHVPGYNSRKEFIAAQGPLPVTLNEFWRMIWEKN 908

  Fly  1189 VRVIVQVTQFREGNTIKCHEYYP-----YNVRGLTVTIKSKEVLELYDRT--ELTVVHDKYGLKE 1246
            |..||.:|:..|...:||.:|:|     ||  .::||..|:  :||.|.|  :..:.:.|.....
Zfish   909 VYTIVMLTKCNEMGRVKCEKYWPSATSHYN--NISVTTTSE--IELDDWTIRDFRIKNVKTAETR 969

  Fly  1247 KVIHYYFKKWPDHGVPEDPMHLIMFVKKVK--AEKRPSYSPIVVHCSAGVGRTGTFIGLDLIMQR 1309
            .|..::|..||||||||....||.|...|:  .::...:||.|||||||||||||||.:|.:..:
Zfish   970 YVRQFHFTAWPDHGVPETTEILIDFRHLVREHMDQYSRHSPTVVHCSAGVGRTGTFIAIDHLSFQ 1034

  Fly  1310 LKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYELVKHK 1353
            ::.:|.::|:..|..:|..|..||||:.||.:|:.|.|:|::.:
Zfish  1035 IERDSMVDIYGIVHDMRMHRALMVQTEDQYVYLHQCAYDLIRSR 1078

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 21/116 (18%)
PTPc 1100..1345 CDD:214550 100/257 (39%)
PTPc 1125..1348 CDD:238006 94/235 (40%)
ptprjb.1XP_017209718.2 NupH_GANP 450..>493 CDD:318883 18/108 (17%)
FN3 568..653 CDD:238020 21/116 (18%)
FN3 655..729 CDD:238020 23/112 (21%)
PTPc 817..1071 CDD:214550 101/283 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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