Sequence 1: | NP_611093.2 | Gene: | Ptp52F / 36790 | FlyBaseID: | FBgn0034085 | Length: | 1433 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031756782.1 | Gene: | ptprf / 100493254 | XenbaseID: | XB-GENE-495325 | Length: | 1920 | Species: | Xenopus tropicalis |
Alignment Length: | 1578 | Identity: | 355/1578 - (22%) |
---|---|---|---|
Similarity: | 587/1578 - (37%) | Gaps: | 420/1578 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 ILWIAGVQGQTVGSLVAVSESQELAEKVEVTVVSTVYTLGFSISNEADYSIDKVICRNGSGSETE 83
Fly 84 ANAAHVCENLNPCTFYTSVVSFRSNVSGKP-PPSDQTIYAYTEYKQPKTTVTSVVATANTIKVTW 147
Fly 148 QTNDRACVESFGITAKATDYTKSFQLLNDKSSQTFV--NLSACLTHTITLDTRNNASVVVDTDAT 210
Fly 211 DVDTQYAEPGD--LVMNVTNLASGITMITWGDPSEKN-CISNY-VF----------KWQRNDCGT 261
Fly 262 DQNQDTTTDVPSTETTNEIDYVTTTPMETTPDTPSDEVKCEWTDVSSDGKLREYLLTDLQGCDLY 326
Fly 327 TFQVFINENSTAKASQTFTSAEKLVSAVYEPSPTAYPTQLHWTWFSPQNHPKCVANYSVTLTGPI 391
Fly 392 QRSENKTMNVITEETFAIFDDLDPCGIYLVEIVPNQLNGSAGTKYQEQSTVGEDQPSVIQDPVVE 456
Fly 457 AEAYSM-----EVSWKTPEYADL--CIDGY-----RLSGWMEDDKLVEVEALSITTQNTTVVFDK 509
Fly 510 NLLACQVYIIQIIPYTKENLDGQLRQVGVETKAAIVDYTKVKLEMKNAGSEFIDLIAFNADYNNS 574
Fly 575 CPTIFALFTCNATTQVRNPYAERYV--EGHSKQG---------------------FNASLSPLSP 616
Fly 617 YATYVCKVILYNVAGP---SEPVVDADMHTTTYFPEQPESVMLEKSTVSSLLFNWQPPTYTNGPI 678
Fly 679 KYYQAFLMRHEASYFVPADCAIVEQDTKSETKGDPSVNFTGLAPAVRYMMQVAAQNDFGMGVYTE 743
Fly 744 PVIGIT--LPAVSDSVTQLTVLTQGPVNNNAVYEANVTITWKVPCKSNGDIEYFQLAFNGTRNNF 806
Fly 807 APVSFERRVELDTGNKQGRMSYTETEMQPQFDYTVEVSVK-NRDVEQLSSSVPGSWQSPAGLPTI 870
Fly 871 PSDELI-KQMRANVEETSNPTKTAIV---RLP-------------------------ADIMTSAS 906
Fly 907 GDIKWMALMISQKNCAGVPHLKYDVS-SDWPKVLSYQEAGAD---GTGDCSL---EYQTTEE-RW 963
Fly 964 H--------------------PEPVQ-------------RQRRDGEVTSDEEIV----------F 985
Fly 986 TIGLDKCSEVQKTYCNGPLLPDTDYNVVV---------RLFTASGYSDAAVLNFKTKA------- 1034
Fly 1035 -------AIKVTLILVSVCSCLLLAFVLGLTVLWVRKRL---AWKRDSGQGIED----------- 1078
Fly 1079 --------------PFGNV-------------IAKNFAIFYTEVAKPE---KLAREFKEITVVAL 1113
Fly 1114 ELSYSASELGCH--KNRYADIFPYDKNRVIL-DID-AEGSDYINASFIDGHTRKKEYIATQGPKP 1174
Fly 1175 ESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYP------YNVRGLTVTIKSKEVLELYDRT 1233
Fly 1234 ELTVVHDKYGLKEK--VIHYYFKKWPDHGVPEDPMHLIMFVKKVKAEKRPSYSPIVVHCSAGVGR 1296
Fly 1297 TGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYELVK---HKIPRAA 1358
Fly 1359 L-----KMDGRP--KSVT 1369 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptp52F | NP_611093.2 | FN3 | 648..749 | CDD:238020 | 23/100 (23%) |
PTPc | 1100..1345 | CDD:214550 | 106/256 (41%) | ||
PTPc | 1125..1348 | CDD:238006 | 101/234 (43%) | ||
ptprf | XP_031756782.1 | I-set | 30..121 | CDD:400151 | |
Ig strand A | 30..33 | CDD:409353 | |||
Ig strand A' | 39..42 | CDD:409353 | |||
Ig strand B | 47..54 | CDD:409353 | |||
Ig strand C | 60..65 | CDD:409353 | |||
Ig strand C' | 68..70 | CDD:409353 | |||
Ig strand D | 77..81 | CDD:409353 | |||
Ig strand E | 83..90 | CDD:409353 | |||
Ig strand F | 100..108 | CDD:409353 | |||
Ig strand G | 111..121 | CDD:409353 | |||
IgI_2_RPTP_IIa_LAR_like | 133..229 | CDD:409400 | |||
Ig strand B | 149..153 | CDD:409400 | |||
Ig strand C | 162..166 | CDD:409400 | |||
Ig strand E | 193..197 | CDD:409400 | |||
Ig strand F | 207..212 | CDD:409400 | |||
Ig strand G | 219..222 | CDD:409400 | |||
IgI_3_RPTP_IIa_LAR_like | 238..319 | CDD:409401 | 14/90 (16%) | ||
Ig strand B | 252..256 | CDD:409401 | |||
Ig strand C | 265..269 | CDD:409401 | 0/2 (0%) | ||
Ig strand E | 286..290 | CDD:409401 | 1/3 (33%) | ||
Ig strand F | 298..303 | CDD:409401 | 2/25 (8%) | ||
Ig strand G | 311..314 | CDD:409401 | 0/2 (0%) | ||
FN3 | 322..411 | CDD:238020 | 24/103 (23%) | ||
FN3 | 418..510 | CDD:238020 | 24/124 (19%) | ||
FN3 | 515..603 | CDD:238020 | 17/104 (16%) | ||
fn3 | 611..698 | CDD:394996 | 18/91 (20%) | ||
FN3 | 713..818 | CDD:238020 | 25/120 (21%) | ||
FN3 | 823..904 | CDD:238020 | 20/91 (22%) | ||
fn3 | 921..1002 | CDD:394996 | 17/99 (17%) | ||
fn3 | 1018..1077 | CDD:394996 | 9/63 (14%) | ||
R-PTPc-F-1 | 1348..1623 | CDD:350474 | 112/284 (39%) | ||
R-PTP-F-2 | 1626..1915 | CDD:350477 | 7/25 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR19134 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |