DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and ptprb

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001303656.1 Gene:ptprb / 100149130 ZFINID:ZDB-GENE-101108-3 Length:1892 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550
PTPc 1125..1348 CDD:238006
ptprbNP_001303656.1 FN3 113..199 CDD:238020
fn3 216..276 CDD:306538
FN3 290..366 CDD:328772
fn3 380..453 CDD:306538
fn3 561..632 CDD:306538
FN3 647..727 CDD:328772
fn3 735..808 CDD:306538
fn3 823..896 CDD:306538
fn3 911..990 CDD:306538
FN3 1001..1081 CDD:328772
fn3 1090..1154 CDD:306538
FN3 <1190..1246 CDD:328772
fn3 1263..1340 CDD:306538
PTPc 1637..1867 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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