DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and ptprd

DIOPT Version :10

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_031751329.1 Gene:ptprd / 100145434 XenbaseID:XB-GENE-478374 Length:1940 Species:Xenopus tropicalis


Alignment Length:1499 Identity:353/1499 - (23%)
Similarity:573/1499 - (38%) Gaps:385/1499 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 SETEANAAHVCENLNPCTFYTSVVSFRSNVSGKPPPSDQTIYAYTEYKQPKTTVTSVVATANTIK 144
            ::...:|.:.|..::......::.........|||.:            |..|    .:||.:|.
 Frog   300 TDVRQSANYTCVAMSTLGVIEAIAQINVKALPKPPGT------------PMVT----ESTATSIT 348

  Fly   145 VTWQTNDRACVESFGITAKATDYTKSFQLLNDKSSQTF--VNLSACLTHTITLDTRNNASVVVDT 207
            :||.:.:...|..:.|..|.....:.::.::..::..:  ..||....:...:...||......:
 Frog   349 LTWDSGNPEPVSYYIIQHKPKSSEEQYKEIDGVATTRYSVAGLSPYSEYEFRVVAVNNIGRGPPS 413

  Fly   208 DATDVDTQYAEPGDLVMNV--TNLASGITMITWGDPSEKN-CISNY-----------VFKWQRND 258
            :.....|....|.....||  ..|:|...::.|.:|.|.| .|..|           :..|.:::
 Frog   414 EPVMTRTSEQAPSSPPRNVQARMLSSTTILVQWEEPEEPNGQIQGYRVYYTMDPTQHINSWTKHN 478

  Fly   259 CGTDQNQDTT-----------------TDVPSTETTNEIDYVTTTPMETTP----DTPSDE--VK 300
            ..  .:|.||                 |.|.....:|:|..:|.|.:.:.|    ..|..|  :.
 Frog   479 VA--DSQITTIGNLEPQKTYSVKVLAFTSVGDGPLSNDIQVITQTGVPSQPLNFKAEPESETSIL 541

  Fly   301 CEWTDVSSD-----------GKLRE-----------YLLTDLQGCDLYTFQVFINENSTAKASQT 343
            ..||...||           |...|           |.|..|:...||.|::.........||..
 Frog   542 LSWTPPRSDTISSYDLYYKEGDHAEEQVITIDPATSYRLQGLKPNSLYYFRLAARAQVGLGASTA 606

  Fly   344 FTSAEKLVSAVYEPSPTAYP----------TQLHWTWFSP----QNHPKCVANYSVTLTGPIQRS 394
            ..||..:.|     .|:|.|          |.:..:|..|    ||..  :..||:..|| :...
 Frog   607 EISARTMQS-----KPSAPPQDIRCNSQSSTSILVSWLPPPVEKQNGK--IMGYSIKYTG-VDTD 663

  Fly   395 ENKTMNV--ITEETFAIFDDLDPCGIYLVEIVPNQLNGSAGTKYQ-------------EQSTV-- 442
            :.|:..:  |:.||..          ||:|    ||  ...|:|:             |.|.:  
 Frog   664 DAKSHEILSISSETRQ----------YLLE----QL--EKWTQYRIIMIAYTDVGPGPESSPILI 712

  Fly   443 --GEDQPSVIQDP--VVEAEAY---SMEVSWKTP----EYADLCIDGYRL--------------- 481
              .||.||   .|  .||.||.   |::|||::|    ::..  |.||::               
 Frog   713 RTDEDVPS---GPPRKVEVEAVNSTSVKVSWRSPVANKQHGQ--IRGYQVHYVRMENGEPKGQPM 772

  Fly   482 --------SGWMEDDKLVEVEALSITTQNTTVVFDKNLLACQVYIIQIIPYTKENLDGQLRQVGV 538
                    :.|..||          ||::..::  ..|.....|.|.:..||.:....:.:...|
 Frog   773 LKDVMLADAQWEYDD----------TTEHEMII--SGLQPETAYSITVTAYTTKGDGARSKPKIV 825

  Fly   539 ETKAAIVDYTKVKL---EMKNAGSEFIDLIAFNADYNNSCPTI-----FALFTCNATTQVRNPYA 595
            .|.||:....::.:   :|..|      ||.:........|.|     |.....:..|.:.  ::
 Frog   826 STSAAVPGKPRLVISHTQMNTA------LIQWYPPVETFGPVIGYRLKFGRKDLDTLTTLE--FS 882

  Fly   596 ERYVEGHSKQGFNASLSPLSPYATYVCKVILYNVAGPSEPVVDADMHTTTYFPEQ-----PESVM 655
            |:  |.|    |.|  :.:...|.|:.|:...|..|..|.:|     .....||:     |:::.
 Frog   883 EK--EEH----FTA--TDIHKGALYIFKLSARNKVGYGEEIV-----KELSIPEEPPSGFPQNIH 934

  Fly   656 LEKSTVSSLLFNWQPPTY--TNGPI-KY---YQAFLMRHEASYFVPADCAIVEQDTKSETKGDPS 714
            .:.::.:|:|..||.|..  .||.: ||   |:...:.|     .|.:..||..||        :
 Frog   935 CDSTSSTSVLITWQHPNLEERNGLLTKYTLMYRDINLPH-----YPIEVPIVPADT--------T 986

  Fly   715 VNFTGLAPAVRYMMQVAAQNDFGMGVYTEPVIGITLPAVSDSVTQLTVLTQGPVNNNAVYEANVT 779
            |..|||.|...|.:::.|....|.|.::..|...|||     |.|........|  .||.:.:|.
 Frog   987 VTLTGLKPDTTYDVKLRAHTSKGPGPFSPSVQFRTLP-----VDQAVFAKNFHV--KAVMKTSVL 1044

  Fly   780 ITWKVPCKSNGDIEYFQLAFNGTRNNFAPVSFERRVELDTGNKQGRMSY-TETEMQPQFDYTVEV 843
            ::|::|...|..:.:..|..:|          :..:|:|     ||.:. ..|.::|:..|:..:
 Frog  1045 LSWEIPENYNSALPFKILYDDG----------KMAMEVD-----GRATQKLITNLKPETSYSFVL 1094

  Fly   844 SVKNRDVEQLSSSVPGSWQSPAGLPTIPSDELIKQMRANVEETSNPTKTAIVRLPADIMTSASGD 908
            :  ||      .:..|..|......|.|  :::|.....:.:| |......|.||..:   |:..
 Frog  1095 T--NR------GNSAGGLQHRVTAKTAP--DVLKTKPVFIGKT-NSDGMITVELPEVL---ANDR 1145

  Fly   909 IK-WMALMISQKNCAGVPHLKYDVSSDWPKVLSYQEAGADGTGDCSLEYQTTEERWHPEPVQRQR 972
            || :..:::..|...|             |.:...|:..:...|..|:..:.:.|     ..|.|
 Frog  1146 IKGYYIVIVPLKKSRG-------------KFIKPWESPDEMELDDLLKEISRKRR-----SLRFR 1192

  Fly   973 RDGE----VTSDEEIV---FTIGLDKCSEVQKTYC---NGPLLPDTDYNVVV---------RLFT 1018
            |:.|    :.:..:::   ||:|      .||.|.   |..|....:|...|         .:|.
 Frog  1193 REAEQKPYIAAHFDVLPTEFTLG------DQKQYGGFENKQLQNGQEYVFFVLAVIEHSESTMFA 1251

  Fly  1019 ASGYSDAAV--------LNFKTKAAIKVT--LILVSVCSCLLLAFVLGLTVLWVRKRLAWKRDS- 1072
            .|.|||..|        :..:.:..|.|.  ::.|....|:::|.:|..:....|||.  :.|| 
 Frog  1252 TSPYSDPVVSMEIDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKSSKPDRKRT--ESDSR 1314

  Fly  1073 -----------------------------GQGIEDPFGNVIAKNFA----IFYTEVA------KP 1098
                                         |.|:.....|:.:.:.|    |...|:|      |.
 Frog  1315 KSSLPNSKEIPSHHPTDPVELRRLNFQTPGSGVSGYPRNLHSSSMANHPPIPILELADHIERLKA 1379

  Fly  1099 E---KLAREFKEITV-VALELSYSASELGCHKNRYADIFPYDKNRVILDI--DAEGSDYINASFI 1157
            .   |.::|::.|.. ......:|..|:...|||||::..||.:||:|..  ...||||||:::|
 Frog  1380 NDNLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYINSNYI 1444

  Fly  1158 DGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYPYNVRGL----T 1218
            ||:.::..|||||||.||:..|||||:.:.....||.:|:..|.:.|||.:|:|  .||.    .
 Frog  1445 DGYRKQNAYIATQGPLPETFGDFWRMMWEQRTATIVMMTKLEERSRIKCDQYWP--SRGTETYGL 1507

  Fly  1219 VTIKSKEVLELYDRTELTVVHDKYGLKEK--VIHYYFKKWPDHGVPEDPMHLIMFVKKVKAEKRP 1281
            :.|...:.:||...|..|....|.|..||  |..:.|..||||||||.|...:.|:::||....|
 Frog  1508 IQITLLDTVELATYTVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPP 1572

  Fly  1282 SYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYACT 1346
            ...|:||||||||||||.||.:|.:::|::.|..::|:..|..:|.||..||||:.||.|::...
 Frog  1573 DAGPMVVHCSAGVGRTGCFIVIDAMLERIRHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDAL 1637

  Fly  1347 YELV 1350
            .|.|
 Frog  1638 LEAV 1641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 29/111 (26%)
PTPc 1100..1345 CDD:214550 103/253 (41%)
ptprdXP_031751329.1 I-set 31..123 CDD:400151
Ig strand B 48..52 CDD:409353
Ig strand C 61..65 CDD:409353
Ig strand E 85..92 CDD:409353
Ig strand F 103..108 CDD:409353
Ig strand G 116..119 CDD:409353
IgI_2_RPTP_IIa_LAR_like 135..234 CDD:409400
Ig strand A 135..137 CDD:409400
Ig strand A' 142..146 CDD:409400
Ig strand B 149..158 CDD:409400
Ig strand C 163..169 CDD:409400
Ig strand C' 171..173 CDD:409400
Ig strand D 182..186 CDD:409400
Ig strand E 198..203 CDD:409400
Ig strand F 212..219 CDD:409400
Ig strand G 222..233 CDD:409400
IgI_3_RPTP_IIa_LAR_like 247..328 CDD:409401 2/27 (7%)
Ig strand A 247..249 CDD:409401
Ig strand A' 253..257 CDD:409401
Ig strand B 260..268 CDD:409401
Ig strand C 273..279 CDD:409401
Ig strand C' 281..283 CDD:409401
Ig strand D 286..290 CDD:409401
Ig strand E 295..300 CDD:409401 353/1499 (24%)
Ig strand F 307..314 CDD:409401 1/6 (17%)
FN3 312..>746 CDD:442628 98/478 (21%)
Ig strand G 318..327 CDD:409401 0/8 (0%)
FN3 721..827 CDD:238020 24/119 (20%)
FN3 <797..1135 CDD:442628 88/404 (22%)
FN3 930..1021 CDD:238020 27/103 (26%)
R-PTPc-D-1 1362..1645 CDD:350472 109/282 (39%)
R-PTP-D-2 1646..1937 CDD:350476
Blue background indicates that the domain is not in the aligned region.

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