DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbk and Igfals

DIOPT Version :10

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_445781.3 Gene:Igfals / 79438 RGDID:68429 Length:603 Species:Rattus norvegicus


Alignment Length:701 Identity:173/701 - (24%)
Similarity:279/701 - (39%) Gaps:160/701 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 HAQKALEAAAAAAKASNKYNIDCPKDCKC--------LNVLFDCDKLHLERVP-VLPSYVQTLHL 298
            |.|.....|:|.|:..     .||..|.|        |:|.  |...:|..:| .:|...:.|.|
  Rat    24 HLQGTDPGASADAEGP-----QCPVACTCSHDDYTDELSVF--CSSKNLTHLPDDIPVSTRALWL 81

  Fly   299 ANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPK--FIGLSGLKHLVLANNHITSISSESLAALP 361
            ..|.|:.                        ||.  |..||.|..|.|..:.:.|:..::|..|.
  Rat    82 DGNNLSS------------------------IPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQ 122

  Fly   362 LLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPI 426
            .|..|.|.||:|..:.:..|..:.:|..|.||.|.:..:.|..|..|::|.||.|..|.|..||.
  Rat   123 NLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPD 187

  Fly   427 RVFKNLNQLKKLALNFNQLE-INWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMN 490
            .||:.|..|.:|.|..|:|. :..:.|.||..::.|.|..|.:|:::..||..:.:::.:.|..|
  Rat   188 TVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRN 252

  Fly   491 QISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLK 555
            .|::::.:....:..||.|:||.|.::.:..||:.....|.||.|::|||...:|:....||.|:
  Rat   253 LITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLE 317

  Fly   556 TLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQI 620
            .|.|.|||::.|.|.||:.:..||.|.|..|:::     :.....|.||..:..::|.||.|:.:
  Rat   318 ELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQIT-----EVRVGAFSGLFNVAVMNLSGNCLRSL 377

  Fly   621 STKAMSGLNNLEILNLGSNALASIQVNAFEHMLRLNKLVFK--SLNFICDCDLVWFQQWLK---- 679
            ..:...||:.|..|:|..:.|..::::.|..:..|.:|..:  |::.|.:..|....:.|:    
  Rat   378 PERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLT 442

  Fly   680 -NR---FPQQAEHAVCGYPEHLLDRHLKSLSSSELVCVDSPKPRVEQEPDDMLAVNAANITLECI 740
             ||   .|:|....: |:.|:||      ||.::|..:                           
  Rat   443 TNRLTHLPRQLFQGL-GHLEYLL------LSYNQLTTL--------------------------- 473

  Fly   741 ASSPTAASLAAADELKIKWRHDNQHVQERPAVHDGASTETQIRHDLSTNQTSIYGYLRLTNVTYE 805
             |:.....|..|..|.|...|                        |.|          |....:.
  Rat   474 -SAEVLGPLQRAFWLDISHNH------------------------LET----------LAEGLFS 503

  Fly   806 SAG--RYQCVVSNAFGTTYAQKFKISIGIHPTFLQVPSNLTLDAGEMARLVCSASGDPTPEIALQ 868
            |.|  ||..:.:|:.     |.|....|:        ..|.|||....   ||.......:.|||
  Rat   504 SLGRLRYLSLRNNSL-----QTFSPQPGL--------ERLWLDANPWD---CSCPLKALRDFALQ 552

  Fly   869 KFGGSEFPAATERRLQVIREENAFLITNAKPSDSGIYTCTALSAAGEIKVN 919
            .      |....|.:|.:.|.:     :.:|    :||...::.||...|:
  Rat   553 N------PGVVPRFVQTVCEGD-----DCQP----VYTYNNITCAGPANVS 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR <293..642 CDD:443914 103/351 (29%)
leucine-rich repeat 293..316 CDD:275380 4/22 (18%)
leucine-rich repeat 317..338 CDD:275380 4/22 (18%)
leucine-rich repeat 339..362 CDD:275380 6/22 (27%)
leucine-rich repeat 363..386 CDD:275380 7/22 (32%)
leucine-rich repeat 387..410 CDD:275380 8/22 (36%)
leucine-rich repeat 411..434 CDD:275380 11/22 (50%)
leucine-rich repeat 435..457 CDD:275380 8/22 (36%)
leucine-rich repeat 458..481 CDD:275380 6/22 (27%)
leucine-rich repeat 482..505 CDD:275380 3/22 (14%)
leucine-rich repeat 506..529 CDD:275380 8/22 (36%)
leucine-rich repeat 530..553 CDD:275380 9/22 (41%)
leucine-rich repeat 554..577 CDD:275380 10/22 (45%)
leucine-rich repeat 578..604 CDD:275380 6/25 (24%)
leucine-rich repeat 607..630 CDD:275380 6/22 (27%)
leucine-rich repeat 631..652 CDD:275380 5/20 (25%)
LRRCT 665..712 CDD:214507 14/54 (26%)
Ig_3 717..816 CDD:464046 13/100 (13%)
Ig 835..924 CDD:472250 19/85 (22%)
Ig strand B 851..855 CDD:409353 0/3 (0%)
Ig strand C 864..868 CDD:409353 1/3 (33%)
Ig strand E 890..894 CDD:409353 0/3 (0%)
Ig strand F 904..909 CDD:409353 2/4 (50%)
Ig strand G 917..920 CDD:409353 1/3 (33%)
Ig_3 927..1013 CDD:464046
IgfalsNP_445781.3 LRRNT 40..78 CDD:214470 10/39 (26%)
leucine-rich repeat 57..75 CDD:275380 5/19 (26%)
LRR 1 75..96 7/44 (16%)
leucine-rich repeat 79..99 CDD:275380 8/43 (19%)
LRR 85..476 CDD:443914 120/454 (26%)
LRR 2 99..120 5/20 (25%)
leucine-rich repeat 103..123 CDD:275380 5/19 (26%)
LRR 3 123..144 7/20 (35%)
LRR 4 147..168 7/20 (35%)
LRR 5 171..192 10/20 (50%)
leucine-rich repeat 175..195 CDD:275380 9/19 (47%)
LRR 6 195..216 6/20 (30%)
leucine-rich repeat 196..219 CDD:275380 8/22 (36%)
LRR 7 219..240 6/20 (30%)
leucine-rich repeat 220..243 CDD:275380 6/22 (27%)
LRR 8 243..264 3/20 (15%)
leucine-rich repeat 244..267 CDD:275380 3/22 (14%)
LRR 9 267..288 8/20 (40%)
leucine-rich repeat 268..291 CDD:275380 8/22 (36%)
LRR 10 291..312 8/20 (40%)
leucine-rich repeat 292..315 CDD:275380 9/22 (41%)
LRR 11 315..336 10/20 (50%)
leucine-rich repeat 316..339 CDD:275380 10/22 (45%)
LRR 12 339..360 6/25 (24%)
leucine-rich repeat 340..363 CDD:275380 8/27 (30%)
LRR 13 363..384 4/20 (20%)
leucine-rich repeat 364..387 CDD:275380 6/22 (27%)
LRR 14 387..408 5/20 (25%)
leucine-rich repeat 388..411 CDD:275380 5/22 (23%)
LRR 15 411..432 5/20 (25%)
leucine-rich repeat 412..435 CDD:275380 5/22 (23%)
LRR 16 435..456 5/20 (25%)
leucine-rich repeat 436..459 CDD:275380 5/23 (22%)
LRR 17 459..480 7/54 (13%)
leucine-rich repeat 460..481 CDD:275380 7/54 (13%)
LRR 18 483..504 7/54 (13%)
leucine-rich repeat 484..507 CDD:275380 8/56 (14%)
LRR_8 486..536 CDD:404697 18/96 (19%)
LRR 19 507..528 6/33 (18%)
LRRCT 535..578 CDD:214507 12/60 (20%)
Blue background indicates that the domain is not in the aligned region.

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