DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbk and lrig3

DIOPT Version :10

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_001103817.1 Gene:lrig3 / 564554 ZFINID:ZDB-GENE-130530-866 Length:1070 Species:Danio rerio


Alignment Length:1029 Identity:318/1029 - (30%)
Similarity:522/1029 - (50%) Gaps:116/1029 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 NGF--VADDGGQYEHAQKALEAAAAAAKASNKYNIDCPKDCKCLNVLFDCDKLHLER-VPVLPSY 292
            :||  |..|..:.||.                   .||..|.|...|.||.:|...| |..||:.
Zfish    18 SGFTAVTGDSRRTEHE-------------------PCPSVCSCTGNLADCSRLKAGRTVERLPAR 63

  Fly   293 VQTLHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPKFIGLSG-LKHLVLANNHITSISSES 356
            :..|.|::|||.........:|..|:::.|..|..|.||.....:| |..|:||:|.|..:|||.
Zfish    64 ITRLDLSHNKLRVFPEALFSSLPQLSEIKLSNNEFESIPDLGPNAGNLSSLILASNRIGRVSSER 128

  Fly   357 LAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATL-NNLTDLELSNNR 420
            |:.|..|.|||||.|.:..:...:||.. .|.:|.::.|.|:.:....|:.| ::|..|:|:.||
Zfish   129 LSPLLTLETLDLSNNNIVDVYAGAFPPI-PLKNLFMNNNRISTLEHGCFSNLSSSLLVLKLNKNR 192

  Fly   421 LSTLPIRVFKNLNQLKKLALNFNQL-EINWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIET 484
            |:::|.::| :|..|:.|.|:.|:| .:...||:||..:::|:::.|.|..|.||.|:.::.:|.
Zfish   193 LNSIPAKIF-SLPHLQHLELSRNRLRRVEGLTFQGLHGLRSLKMQRNGISRLMDGAFWGLNNMEV 256

  Fly   485 IDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLD 549
            :.|..|.::.:|:..|:.|..|:.|:||.|:||||:.|.|||.|.|..||||.|.::..:.....
Zfish   257 LQLEFNNLTEVSKGWLYGLLTLQQLHLSHNSISRIKPDAWEFCQKLAELDLSWNQLSRLEEGSFV 321

  Fly   550 CLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHG 614
            .|..|:.|::.:||:.::.:..|..:.||:.|:|:.|.:||.|||.:  .||..|..||:|.|.|
Zfish   322 GLSVLEQLHIGNNRISFIADGAFRGLTNLQTLDLKFNEISWTIEDMN--GPFSALDNLRKLFLQG 384

  Fly   615 NNLKQISTKAMSGLNNLEILNLGSNALASIQVNAFEHMLRLNKLVFKSLNFICDCDLVWFQQWLK 679
            |.::.::.|:.:||..||.|:|.:||:.|:|.|||..|.:|::|...:.:.:|||.|.||..|:.
Zfish   385 NRIRSVTRKSFTGLEMLEQLDLSNNAIMSLQANAFSQMKKLSELHLNTSSLLCDCQLKWFSLWVA 449

  Fly   680 NRFPQQAEHAVCGYPEHLLDRHLKSLSSSELVCVDSPKPRVEQEPDDMLAVNAANITLECIASSP 744
            .:......:|.|.:|..|..|.:.|::..|.||.|.|||::..:|:...|:...|:|..|.|:|.
Zfish   450 EQAFLALLNASCAHPHLLKGRSVFSIAQDEFVCDDFPKPQITVQPETQSAIKGNNVTFVCSAASS 514

  Fly   745 TAASLAAADELKIKWRHDNQHVQERPAVHD-----GASTETQIRHDLSTNQTSIYGYLRLTNVTY 804
            :.:.:..|      |:.||:.:.| |.:.:     .|:.||....:.:|.       |:|..|.:
Zfish   515 SDSPMTFA------WKKDNELLSE-PEIQNQAHVRAAAGETGELTEYTTT-------LQLRQVEF 565

  Fly   805 ESAGRYQCVVSNAFGTTYAQKFKISIGIHPTFLQVPSNLTLDAGEMARLVCSASGDPTPEIALQK 869
            .|.||||||:||.||::|:.|.|:::.:.|.|.:.|.:||:.||..|||.|:|||.|:|:||.||
Zfish   566 TSEGRYQCVISNHFGSSYSNKAKLTVNMLPFFTKTPMDLTIRAGATARLECAASGHPSPQIAWQK 630

  Fly   870 FGGSEFPAATERRLQVIREENAFLITNAKPSDSGIYTCTALSAAGEIKVNATLVVNDKPQPSIPL 934
            .||::||||.|||:.|:..::.|.|.:.|..|.|:|:|||.:.||.|..||||.|.:.|....||
Zfish   631 DGGTDFPAARERRMHVMPRDDVFFIVDVKTEDIGVYSCTAQNTAGAISANATLTVLETPSFLRPL 695

  Fly   935 VHQEVVVGRTCVLQCLSETANADFELEHPHREWFKENKPIHISPTAPDGDRYYFSNNKELLVILN 999
            :.:.|..|.|.||||::..:      ..|...|.|::.|:..:      :|::|:...:||:|::
Zfish   696 LDRAVAKGETAVLQCIAGGS------PPPRLNWTKDDSPLQAT------ERHFFAAGNQLLIIVD 748

  Fly  1000 AQSNDAGHFRCEITDNSRTFTLQSELVVV-----------------------KENLNWVVLLVGI 1041
            |...|||.:.||:::...|......|.|:                       .|:..|..  |||
Zfish   749 AAEGDAGTYTCEMSNPLGTERGNLRLSVLPNPNCDQGPAGGGAVGAAGSGRGPEDDGWTT--VGI 811

  Fly  1042 ITVTVICVVVDCCIIWCTLRYQKKKLRMSLAAERHSTQLRPRSLADLGCSYDEANHRRLTVMSTP 1106
            :.:.|:|.||...::|..:.|..::.....:.........|..:.....|......|:...|.  
Zfish   812 VIIAVVCCVVGTSLVWVVIIYHTRRRNEDCSVTNTDETNLPADIPSYLSSQGTLAERQDGYML-- 874

  Fly  1107 PSEQRCLEQGLTLS----YLRQTDLEAQQDHLSSKDSGTGSD--AAVKRTLDDFEVAMPS----H 1161
            |||.....|.::.|    |:...|:.:    |...|:|:.:|  ||:...|..::..:.|    .
Zfish   875 PSESGSSHQFISSSIGGFYMPPKDMNS----LCQLDTGSEADLEAAIDPLLCHYQGPVGSLLTPG 935

  Fly  1162 KHHTDDEEEEEVEEVYE--ENEPPYIKHTYE--------VNYAEPEQHLFLQNN 1205
            .|::     .|:.:.|.  .:||..:..:|.        .:..:|..|:.|.::
Zfish   936 AHYS-----AELPDTYTVCVSEPRLLSDSYSRKRDFYTCSSSLDPCDHMMLPHD 984

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR <293..642 CDD:443914 124/351 (35%)
leucine-rich repeat 293..316 CDD:275380 6/22 (27%)
leucine-rich repeat 317..338 CDD:275380 6/20 (30%)
leucine-rich repeat 339..362 CDD:275380 11/22 (50%)
leucine-rich repeat 363..386 CDD:275380 9/22 (41%)
leucine-rich repeat 387..410 CDD:275380 6/23 (26%)
leucine-rich repeat 411..434 CDD:275380 9/22 (41%)
leucine-rich repeat 435..457 CDD:275380 9/22 (41%)
leucine-rich repeat 458..481 CDD:275380 7/22 (32%)
leucine-rich repeat 482..505 CDD:275380 6/22 (27%)
leucine-rich repeat 506..529 CDD:275380 13/22 (59%)
leucine-rich repeat 530..553 CDD:275380 7/22 (32%)
leucine-rich repeat 554..577 CDD:275380 5/22 (23%)
leucine-rich repeat 578..604 CDD:275380 11/25 (44%)
leucine-rich repeat 607..630 CDD:275380 9/22 (41%)
leucine-rich repeat 631..652 CDD:275380 11/20 (55%)
LRRCT 665..712 CDD:214507 14/46 (30%)
Ig_3 717..816 CDD:464046 29/103 (28%)
Ig 835..924 CDD:472250 45/88 (51%)
Ig strand B 851..855 CDD:409353 3/3 (100%)
Ig strand C 864..868 CDD:409353 2/3 (67%)
Ig strand E 890..894 CDD:409353 1/3 (33%)
Ig strand F 904..909 CDD:409353 2/4 (50%)
Ig strand G 917..920 CDD:409353 0/2 (0%)
Ig_3 927..1013 CDD:464046 25/85 (29%)
lrig3NP_001103817.1 leucine-rich repeat 64..87 CDD:275378 6/22 (27%)
LRR 88..436 CDD:443914 126/351 (36%)
leucine-rich repeat 88..110 CDD:275378 6/21 (29%)
leucine-rich repeat 111..134 CDD:275380 11/22 (50%)
leucine-rich repeat 135..156 CDD:275380 9/20 (45%)
leucine-rich repeat 158..205 CDD:275380 15/47 (32%)
leucine-rich repeat 206..229 CDD:275380 9/22 (41%)
leucine-rich repeat 230..253 CDD:275380 7/22 (32%)
leucine-rich repeat 254..277 CDD:275380 6/22 (27%)
leucine-rich repeat 278..301 CDD:275380 13/22 (59%)
leucine-rich repeat 302..325 CDD:275380 7/22 (32%)
leucine-rich repeat 326..349 CDD:275380 5/22 (23%)
leucine-rich repeat 377..400 CDD:275380 9/22 (41%)
leucine-rich repeat 401..422 CDD:275380 11/20 (55%)
PCC 405..>483 CDD:188093 26/77 (34%)
Ig_3 487..577 CDD:464046 29/103 (28%)
IgI_LRIG1-like 597..686 CDD:409420 45/88 (51%)
Ig strand A' 603..607 CDD:409420 2/3 (67%)
Ig strand B 610..619 CDD:409420 4/8 (50%)
Ig strand C 625..630 CDD:409420 2/4 (50%)
Ig strand C' 633..635 CDD:409420 1/1 (100%)
Ig strand D 643..647 CDD:409420 1/3 (33%)
Ig strand E 651..658 CDD:409420 2/6 (33%)
Ig strand F 664..672 CDD:409420 5/7 (71%)
Ig strand G 675..686 CDD:409420 6/10 (60%)
I-set 689..776 CDD:400151 27/98 (28%)
Ig strand B 706..710 CDD:409353 2/3 (67%)
Ig strand C 719..723 CDD:409353 0/3 (0%)
Ig strand E 742..746 CDD:409353 2/3 (67%)
Ig strand F 756..761 CDD:409353 1/4 (25%)
Ig strand G 769..772 CDD:409353 0/2 (0%)

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