DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbk and Lrrc32

DIOPT Version :10

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_001106850.1 Gene:Lrrc32 / 434215 MGIID:93882 Length:663 Species:Mus musculus


Alignment Length:460 Identity:126/460 - (27%)
Similarity:198/460 - (43%) Gaps:97/460 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 CKCLNVLFDCDKLHLERVP-VLPSYVQTLHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPK 332
            |:.:|....|..|.|.:|| ||...:|.|:|:.|:|....|..:.....|..:.|..|.:..:..
Mouse    27 CRTVNKEALCHGLGLLQVPSVLSLDIQALYLSGNQLQSILVSPLGFYTALRHLDLSDNQISFLQA 91

  Fly   333 --FIGLSGLKHLVLANNHIT---SISSESLAALPLLRTLDLSRNKLH--TIE--LNSFPK----- 383
              |..|..|:||.||:|.:.   :::|..|..||||.:||||.|.||  .:|  |...|:     
Mouse    92 GVFQALPYLEHLNLAHNRLATGMALNSGGLGRLPLLVSLDLSGNSLHGNLVERLLGETPRLRTLS 156

  Fly   384 --SNNLVHLI--------------LSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNL 432
              .|:|..|.              |..|.:.::.:.:|..|.:||.|.||.|.|:.  |..| :|
Mouse   157 LAENSLTRLARHTFWGMPAVEQLDLHSNVLMDIEDGAFEALPHLTHLNLSRNSLTC--ISDF-SL 218

  Fly   433 NQLKKLALNFN-------------QLEINWSTFRGLESMKNLQLKSNKIRALQD-GVF----YVM 479
            .||:.|.|:.|             |.::.|           |.|:.||:....| .||    |:.
Mouse   219 QQLQVLDLSCNSIEAFQTAPEPQAQFQLAW-----------LDLRENKLLHFPDLAVFPRLIYLN 272

  Fly   480 HKIETIDL------------------AMNQISSLSRQGLFN-LTKLRHLNLSFNAISRIEVDTWE 525
            .....|.|                  :.:.:|:.||....: |::|.:|:||:|.|..:.....|
Mouse   273 VSNNLIQLPAGLPRGSEDLHAPSEGWSASPLSNPSRNASTHPLSQLLNLDLSYNEIELVPASFLE 337

  Fly   526 FTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSW 590
            ...||..|:||.|.:..|:.:.:|.|..|..|:|:||.|:.|:..| ..:.:|:.|.|:.|.|  
Mouse   338 HLTSLRFLNLSRNCLRSFEARQVDSLPCLVLLDLSHNVLEALELGT-KVLGSLQTLLLQDNAL-- 399

  Fly   591 IIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKA---------MSGLNNLEILNLGSNALASIQV 646
               .:.....|..|..|:||:|.||.:......|         .||:..|.:||:..|::..::.
Mouse   400 ---QELPPYTFASLASLQRLNLQGNQVSPCGGPAEPGPPGCVDFSGIPTLHVLNMAGNSMGMLRA 461

  Fly   647 NAFEH 651
            .:|.|
Mouse   462 GSFLH 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR <293..642 CDD:443914 115/424 (27%)
leucine-rich repeat 293..316 CDD:275380 6/22 (27%)
leucine-rich repeat 317..338 CDD:275380 5/22 (23%)
leucine-rich repeat 339..362 CDD:275380 9/25 (36%)
leucine-rich repeat 363..386 CDD:275380 11/33 (33%)
leucine-rich repeat 387..410 CDD:275380 6/36 (17%)
leucine-rich repeat 411..434 CDD:275380 10/22 (45%)
leucine-rich repeat 435..457 CDD:275380 6/34 (18%)
leucine-rich repeat 458..481 CDD:275380 8/27 (30%)
leucine-rich repeat 482..505 CDD:275380 6/41 (15%)
leucine-rich repeat 506..529 CDD:275380 7/22 (32%)
leucine-rich repeat 530..553 CDD:275380 8/22 (36%)
leucine-rich repeat 554..577 CDD:275380 8/22 (36%)
leucine-rich repeat 578..604 CDD:275380 6/25 (24%)
leucine-rich repeat 607..630 CDD:275380 9/31 (29%)
leucine-rich repeat 631..652 CDD:275380 6/21 (29%)
LRRCT 665..712 CDD:214507
Ig_3 717..816 CDD:464046
Ig 835..924 CDD:472250
Ig strand B 851..855 CDD:409353
Ig strand C 864..868 CDD:409353
Ig strand E 890..894 CDD:409353
Ig strand F 904..909 CDD:409353
Ig strand G 917..920 CDD:409353
Ig_3 927..1013 CDD:464046
Lrrc32NP_001106850.1 PPP1R42 37..278 CDD:455733 71/254 (28%)
LRR 1. /evidence=ECO:0000255 49..72 6/22 (27%)
leucine-rich repeat 55..75 CDD:275380 5/19 (26%)
LRR 2. /evidence=ECO:0000255 73..96 4/22 (18%)
leucine-rich repeat 76..99 CDD:275380 5/22 (23%)
LRR 3. /evidence=ECO:0000255 98..123 8/24 (33%)
leucine-rich repeat 100..126 CDD:275380 9/25 (36%)
LRR 4. /evidence=ECO:0000255 125..148 12/22 (55%)
LRR 126..548 CDD:443914 96/361 (27%)
leucine-rich repeat 127..151 CDD:275380 10/23 (43%)
LRR 5. /evidence=ECO:0000255 149..172 4/22 (18%)
leucine-rich repeat 152..175 CDD:275380 3/22 (14%)
LRR 6. /evidence=ECO:0000255 174..196 3/21 (14%)
leucine-rich repeat 176..199 CDD:275380 4/22 (18%)
LRR 7. /evidence=ECO:0000255 197..220 11/25 (44%)
leucine-rich repeat 200..220 CDD:275380 10/22 (45%)
leucine-rich repeat 221..245 CDD:275380 5/23 (22%)
LRR 8. /evidence=ECO:0000255 222..241 3/18 (17%)
LRR 9. /evidence=ECO:0000255 243..267 9/34 (26%)
leucine-rich repeat 246..267 CDD:275380 8/31 (26%)
LRR 10. /evidence=ECO:0000255 269..287 3/17 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 291..311 3/19 (16%)
LRR 11. /evidence=ECO:0000255 315..338 7/22 (32%)
leucine-rich repeat 318..341 CDD:275380 7/22 (32%)
LRR 12. /evidence=ECO:0000255 340..362 7/21 (33%)
leucine-rich repeat 342..365 CDD:275380 8/22 (36%)
LRR 13. /evidence=ECO:0000255 363..386 9/23 (39%)
leucine-rich repeat 366..388 CDD:275380 8/22 (36%)
LRR 14. /evidence=ECO:0000255 387..409 6/26 (23%)
leucine-rich repeat 389..412 CDD:275380 7/27 (26%)
LRR 15. /evidence=ECO:0000255 411..433 7/21 (33%)
leucine-rich repeat 413..445 CDD:275380 9/31 (29%)
LRR 16. /evidence=ECO:0000255 443..466 5/22 (23%)
leucine-rich repeat 446..467 CDD:275380 6/21 (29%)
LRR 17. /evidence=ECO:0000255 468..489
leucine-rich repeat 469..493 CDD:275380
LRR 18. /evidence=ECO:0000255 491..514
leucine-rich repeat 494..516 CDD:275380
LRR 19. /evidence=ECO:0000255 515..539
leucine-rich repeat 517..538 CDD:275380
leucine-rich repeat 539..560 CDD:275380
LRR 20. /evidence=ECO:0000255 541..559
LRR 21. /evidence=ECO:0000255 561..584
leucine-rich repeat 564..576 CDD:275378
Blue background indicates that the domain is not in the aligned region.

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