DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbk and MstProx

DIOPT Version :9

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster


Alignment Length:605 Identity:121/605 - (20%)
Similarity:196/605 - (32%) Gaps:254/605 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 IDCPKDCKCLNVL------FDCDKLHLERVPVLPSYVQTLHLANNKLNDTTVLEIRNLLNLTKVS 321
            ::|||.|:||.::      .||..|.|.::|.||                               
  Fly   283 LECPKLCQCLYIIDDLELNIDCSNLGLLQIPPLP------------------------------- 316

  Fly   322 LKRNLLEVIPKFIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNN 386
                    ||.:.|:.    |..:||.::.:.:.:|....|::.||:|||:|..:.:|..|.  .
  Fly   317 --------IPSYGGVK----LNFSNNSLSQLPTMTLPGYKLVKRLDVSRNRLTNLSINHLPA--K 367

  Fly   387 LVHLILSFNEITNVNEHSFATLNNLTDLELSNN---------------RLSTLPIRV-------- 428
            |.:|.:|||||.|:.......|..:...:.:.|               |...|.||:        
  Fly   368 LDYLDVSFNEIINMGNDVIKYLRTVPIFKQTGNQWTIHCDDKPLLNFFRHLKLIIRMKSAEMKPM 432

  Fly   429 -FKNLNQLKKLALNFNQLEINWSTFRGLE--------SMKNLQLKSNKIRALQD----------- 473
             ..:|.:|.|..|.|......|...|..|        .::::..|.|.:..:..           
  Fly   433 FLHSLTELPKGFLKFLGKHFIWLGVRKQEYYLINEEQLLQSMHRKLNNLNTIMSIYKYMEWLHRK 497

  Fly   474 --------GVFYVM-------HKIETI---------------------DLAMNQISSLSRQGLFN 502
                    .:||:.       ||.|..                     |:.......:.:|   |
  Fly   498 LIFVNREYDLFYIRQMAAPCPHKCECCYSRDSLILKIDCRNKFVYNFPDIVARNSRLMGKQ---N 559

  Fly   503 LTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLS-NNAI------------NEFK------PQHL 548
            ::....|:||.|.||.|.:..  ..:.|..|||. ||.:            |..|      |.:.
  Fly   560 MSSPMELHLSKNNISNITIAM--LPKELRFLDLRFNNLVTLDDKVLSYLKKNSIKTKLSGNPWNC 622

  Fly   549 DCLHRLKTLNLA--HNRLQYLQENTFDCVKNLEELNLRR----------------NRLSW---II 592
            ||..| ..|::.  |..|:|             ::.|:|                :.|:|   |:
  Fly   623 DCKSR-SVLSILRDHEPLEY-------------DVTLKRCNISPTDCPDVCVCCLDNLTWPSFIV 673

  Fly   593 EDQSAAAPFKGLRKLRRL-------DLHGNNLKQISTKAMSGL------------------NNLE 632
            :.:.     :||.::..|       ||..|||..:|.|..|.:                  |::|
  Fly   674 DCRG-----EGLLQMPSLSSRVTYVDLRNNNLTALSQKNRSSIENRSLKLHLLDNPWSCSCNDIE 733

  Fly   633 ILNLGSNALASIQVNAFEHMLRLN--KLVFKSLNFICDCD--------------------LVWFQ 675
            .:|...:..:||.  .|..:...|  |||..:.:.:|..|                    |:||:
  Fly   734 KINFMKSVSSSIV--DFTEIKCSNGEKLVSINQHIVCPSDLFYYLALAISLVATIIALNFLIWFR 796

  Fly   676 Q----WLKNRFPQQAEHAVC 691
            |    |.       .||.||
  Fly   797 QPVLVWF-------YEHGVC 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR_RI <275..446 CDD:238064 42/200 (21%)
leucine-rich repeat 293..316 CDD:275380 0/22 (0%)
LRR_8 316..373 CDD:290566 13/56 (23%)
leucine-rich repeat 317..338 CDD:275380 3/20 (15%)
leucine-rich repeat 339..362 CDD:275380 4/22 (18%)
leucine-rich repeat 363..386 CDD:275380 8/22 (36%)
LRR_8 386..445 CDD:290566 19/82 (23%)
leucine-rich repeat 387..410 CDD:275380 9/22 (41%)
leucine-rich repeat 411..434 CDD:275380 6/46 (13%)
leucine-rich repeat 435..457 CDD:275380 7/29 (24%)
LRR_8 457..516 CDD:290566 14/105 (13%)
leucine-rich repeat 458..481 CDD:275380 4/48 (8%)
leucine-rich repeat 482..505 CDD:275380 4/43 (9%)
LRR_RI <498..669 CDD:238064 52/237 (22%)
LRR_8 504..564 CDD:290566 21/80 (26%)
leucine-rich repeat 506..529 CDD:275380 7/22 (32%)
leucine-rich repeat 530..553 CDD:275380 11/41 (27%)
leucine-rich repeat 554..577 CDD:275380 4/24 (17%)
LRR_8 576..641 CDD:290566 19/108 (18%)
leucine-rich repeat 578..604 CDD:275380 5/44 (11%)
leucine-rich repeat 607..630 CDD:275380 9/47 (19%)
leucine-rich repeat 631..652 CDD:275380 5/20 (25%)
LRRCT 665..712 CDD:214507 11/51 (22%)
IG 734..823 CDD:214652
Ig 735..823 CDD:143165
I-set 834..924 CDD:254352
Ig 851..924 CDD:299845
IG 936..1027 CDD:214652
Ig 961..1020 CDD:143165
MstProxNP_649719.2 leucine-rich repeat 325..345 CDD:275378 4/19 (21%)
leucine-rich repeat 346..367 CDD:275378 8/22 (36%)
leucine-rich repeat 563..583 CDD:275378 7/21 (33%)
leucine-rich repeat 585..610 CDD:275378 6/24 (25%)
leucine-rich repeat 611..622 CDD:275378 2/10 (20%)
TIR 823..960 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438696
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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