Protein Alignment lbk and trn

DIOPT Version :10

• Sequence 1: NP_611091.2
• Gene: lbk / 36788
• FlyBaseID: FBgn0034083
• Length: 1252
• Species: Drosophila melanogaster
• Sequence 2: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Alignment Length: 793
• Identity: 188/793 - (23%)
• Similarity: 293/793 - (36%)
• Gaps: 233/793 - (29%)

  Fly   244 AQKALEAAAAAAKASNKYNIDCPKDCKCLNVLFDCDKLHLERVPVLPSYVQTLHLANNKLNDTTV 308
            |...:|.||..|        :||..|:|                                :|.|:
  Fly    17 ASIGVEPAAGLA--------NCPPGCQC--------------------------------DDNTL 41

  Fly   309 LEIRNLLNLTKVSLKRNLLEVIPKFIGLS-GLKHLVLANNHITSISSESLAALPLLRTLDLSRNK 372
            :          |......|:|:|  |.|: .::.||:.:|.|.:|.| |:.....|..||||.|.
  Fly    42 V----------VQCGEGQLDVLP--IALNPSIQRLVIKSNKIKTIDS-SIQFYAELTFLDLSSNH 93

  Fly   373 LHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKK 437
            |.||...:|.....|..:.|:.|:|..::..:|..|:.:|.|.|..|::|.|....|..|.::::
  Fly    94 LMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEE 158

  Fly   438 LALNFNQL-EINWSTFRGLESMKNLQLKSNKIRALQDGV-FYVMHKIETIDLAMNQISSLSRQGL 500
            |.|..|:: .::...|.||..::.|.|..|.:..:.|.| |..|..:..:.|.||.:.|:.....
  Fly   159 LNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAF 223

  Fly   501 FNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQ 565
            .:|..|..|.|...::..|..|::...|.|.:||||:|.::......|..|.||:.|:|..|..:
  Fly   224 QDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFE 288

  Fly   566 YLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGN-NLKQISTKAMSGLN 629
            .:.|..                             |.||::|:||:::|. .||::.|.|.|...
  Fly   289 VISEGA-----------------------------FMGLKQLKRLEVNGALRLKRVMTGAFSDNG 324

  Fly   630 NLEILNLGSN-ALASIQVNAFEHMLRLNKLVFKSLNFI------------------------CDC 669
            |||.|||.|| .|..:|..|...:.:|..:|.|: |.:                        |||
  Fly   325 NLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKA-NALTSLAEGLFPWKDLQTLDLSENPLSCDC 388

  Fly   670 DLVWFQQWL--KNRFPQQAEHAVCGYPEHLLDRHLKSLSSSELVCVDSPKPRVEQEPDDMLAVNA 732
            .::|....|  ||.........:|.:||.|....|:.|:.:.:.|..: .||.:.....:|..:|
  Fly   389 RVMWLHNLLVAKNASQDDVSELLCEFPERLRGESLRHLNPAMMGCTHA-DPRKQALIGALLVGSA 452

  Fly   733 ANITLECIASSPTAASLAAADELKIKWRHDNQHVQERPAVHDGASTETQIRHDLSTNQTSIYGYL 797
            |.||           :||.   :..:.||                   :||   .|.:..::|..
  Fly   453 ATIT-----------ALAL---VLYRCRH-------------------KIR---ETIKGGLWGNS 481

  Fly   798 RLTNVTYESAGRYQCVVSNAFGTTYAQKFKISIGIHPTFLQVPSNLTL----------------- 845
            .|.....|    ||....:....:..|....|:|||.||   |:..|.
  Fly   482 ALGRKERE----YQKTFCDEDYMSRHQHHPCSLGIHSTF---PNTYTAPHHPGATHHYGMCPMPV 539

  Fly   846 -DAGEMARLVCSASGDPTPEIALQKFGGSEFPAATERRLQVIREENAFLITNAKPSDSGIYTCTA 909
             |.|.:         ||.     |||.....|.||     :|.|:.   :.|.|          |
  Fly   540 NDLGAI---------DPQ-----QKFQQLVVPTAT-----MISEKK---LNNNK----------A 572

  Fly   910 LSAAGEIKVNATLVVNDKPQPSIPLVHQEVVVGRTCVLQCLSETANADFELEHPHREWFKENKPI 974
            |.:.|.|..:|:.|::.|                       |.|...|...::|....:  .||.
  Fly   573 LVSQGAIDDSASFVLHMK-----------------------SATMGRDVHQQNPQLNHY--TKPQ 612

  Fly   975 HISPTAPDGDRYY 987
            .:|.||..||..|
  Fly   613 FLSATATVGDSCY 625

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbk	NP_611091.2	LRR	<293..642	CDD:443914	97/353 (27%)
		leucine-rich repeat	293..316	CDD:275380	2/22 (9%)
		leucine-rich repeat	317..338	CDD:275380	6/21 (29%)
		leucine-rich repeat	339..362	CDD:275380	7/22 (32%)
		leucine-rich repeat	363..386	CDD:275380	10/22 (45%)
		leucine-rich repeat	387..410	CDD:275380	6/22 (27%)
		leucine-rich repeat	411..434	CDD:275380	8/22 (36%)
		leucine-rich repeat	435..457	CDD:275380	6/22 (27%)
		leucine-rich repeat	458..481	CDD:275380	7/23 (30%)
		leucine-rich repeat	482..505	CDD:275380	5/22 (23%)
		leucine-rich repeat	506..529	CDD:275380	5/22 (23%)
		leucine-rich repeat	530..553	CDD:275380	8/22 (36%)
		leucine-rich repeat	554..577	CDD:275380	5/22 (23%)
		leucine-rich repeat	578..604	CDD:275380	1/25 (4%)
		leucine-rich repeat	607..630	CDD:275380	9/23 (39%)
		leucine-rich repeat	631..652	CDD:275380	10/21 (48%)
		LRRCT	665..712	CDD:214507	13/72 (18%)
		Ig_3	717..816	CDD:464046	19/98 (19%)
		Ig	835..924	CDD:472250	23/106 (22%)
		Ig strand B	851..855	CDD:409353	0/3 (0%)
		Ig strand C	864..868	CDD:409353	0/3 (0%)
		Ig strand E	890..894	CDD:409353	0/3 (0%)
		Ig strand F	904..909	CDD:409353	0/4 (0%)
		Ig strand G	917..920	CDD:409353	0/2 (0%)
		Ig_3	927..1013	CDD:464046	13/61 (21%)
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	7/18 (39%)
		LRR	82..406	CDD:443914	96/353 (27%)
		leucine-rich repeat	84..107	CDD:275380	10/22 (45%)
		leucine-rich repeat	108..131	CDD:275380	6/22 (27%)
		leucine-rich repeat	132..155	CDD:275380	8/22 (36%)
		leucine-rich repeat	156..179	CDD:275380	6/22 (27%)
		leucine-rich repeat	180..204	CDD:275380	7/23 (30%)
		leucine-rich repeat	205..228	CDD:275380	5/22 (23%)
		leucine-rich repeat	229..252	CDD:275380	5/22 (23%)
		leucine-rich repeat	253..276	CDD:275380	8/22 (36%)
		leucine-rich repeat	277..300	CDD:275380	8/51 (16%)
		leucine-rich repeat	301..322	CDD:275380	8/20 (40%)
		leucine-rich repeat	326..350	CDD:275380	10/23 (43%)
		leucine-rich repeat	351..373	CDD:275380	4/22 (18%)
		LRRCT	382..434	CDD:214507	13/51 (25%)