DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbk and Lrig1

DIOPT Version :10

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_032403.2 Gene:Lrig1 / 16206 MGIID:107935 Length:1091 Species:Mus musculus


Alignment Length:1069 Identity:325/1069 - (30%)
Similarity:514/1069 - (48%) Gaps:140/1069 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 AAAAKASNKYNIDCPKDCKCLNVLFDCDKLHLERVP-VLPSYVQTLHLANNKLNDTTVLEIRNLL 315
            :|.|:|..:  ..|...|.|.....||....|..:| .|||:.::|:|:.|:|::.......:|.
Mouse    32 SAGAQAGPR--APCAAACTCAGDSLDCSGRGLATLPRDLPSWTRSLNLSYNRLSEIDSAAFEDLT 94

  Fly   316 NLTKVSLKRNLLEVIPKFIGLS-GLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELN 379
            ||.:|.|..|.|..||.....| |:..|.|.:|.|.|:....|.:...|..||||.|.:..|..:
Mouse    95 NLQEVYLNSNELTAIPSLGAASIGVVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITEIRSS 159

  Fly   380 SFPKSNNLVHLILSFNEITNVNEHSFATLN-NLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFN 443
            .||....:..|.|:.|.|:.:...:|..|: :|..|.||.||::.||::.|| |.:|.:|.||.|
Mouse   160 CFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAFK-LPRLTQLDLNRN 223

  Fly   444 QLE-INWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLR 507
            ::. |...||:||:|::.|:|:.|.|..|.||.|:.:.|:..:.|..|.:..::...|:.||.|.
Mouse   224 RIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALH 288

  Fly   508 HLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTF 572
            .|:||.|:||||:.|.|.|.|.|..|.||.|.:.....:.|..|..|..|.|:||.:.::.|..|
Mouse   289 QLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAF 353

  Fly   573 DCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLG 637
            ..:|:|..|:|..|.:|..|||.|.|  |.||..|.:|.|.||.:|.::.:|.|||.:||.||||
Mouse   354 KGLKSLRVLDLDHNEISGTIEDTSGA--FTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLG 416

  Fly   638 SNALASIQVNAFEHMLRLNKLVFKSLNFICDCDLVWFQQWLKNRFPQQAEHAVCGYPEHLLDRHL 702
            .||:.|:|.:||..|..|.:|...|.:|:|||.|.|...||..|..|....|.|.:||.|..:.:
Mouse   417 ENAIRSVQFDAFAKMKNLKELYISSESFLCDCQLKWLPPWLMGRMLQAFVTATCAHPESLKGQSI 481

  Fly   703 KSLSSSELVCVDSPKPRVEQEPDDMLAVNAANITLECIASSPTAASLAAADELKIKWRHDNQ--- 764
            .|:.....||.|.|||::..:|:..:||...:|...|.|:|.:::.:..|      |:.||:   
Mouse   482 FSVLPDSFVCDDFPKPQIITQPETTMAVVGKDIRFTCSAASSSSSPMTFA------WKKDNEVLA 540

  Fly   765 --------HVQERPAVHDGASTETQIRHDLSTNQTSIYGYLRLTNVTYESAGRYQCVVSNAFGTT 821
                    ||:    ..||...|          .|:|   |.|.:||:...|||||:::|.||:|
Mouse   541 NADMENFAHVR----AQDGEVME----------YTTI---LHLRHVTFGHEGRYQCIITNHFGST 588

  Fly   822 YAQKFKISIGIHPTFLQVPSNLTLDAGEMARLVCSASGDPTPEIALQKFGGSEFPAATERRLQVI 886
            |:.|.::::.:.|:|.::|.::.:..|..|||.|:|:|.|.|:||.||.||::||||.|||:.|:
Mouse   589 YSHKARLTVNVLPSFTKIPHDIAIRTGTTARLECAATGHPNPQIAWQKDGGTDFPAARERRMHVM 653

  Fly   887 REENAFLITNAKPSDSGIYTCTALSAAGEIKVNATLVVNDKPQPSIPLVHQEVVVGRTCVLQCLS 951
            .:::.|.||:.|..|.|:|:|||.::||.:..||||.|.:.|..::||..:.|.||.|...||.:
Mouse   654 PDDDVFFITDVKIDDMGVYSCTAQNSAGSVSANATLTVLETPSLAVPLEDRVVTVGETVAFQCKA 718

  Fly   952 ETANADFELEHPHREWFKENKPIHISPTAPDGDRYYFSNNKELLVILNAQSNDAGHFRCEITDNS 1016
            ..:..      |...|.|..:|:.::      :|::|:...:|||:.|...:|||.:.||:::..
Mouse   719 TGSPT------PRITWLKGGRPLSLT------ERHHFTPGNQLLVVQNVMIDDAGRYTCEMSNPL 771

  Fly  1017 RTFTLQSELVVV------KENLNWVVLLVGIITVTVICVVVDCCIIWCTLRYQKKKLRMSLAAER 1075
            .|....|:|.::      |:...     |||.|:.|:|.:|...::|..:.||.:|.....:...
Mouse   772 GTERAHSQLSILPTPGCRKDGTT-----VGIFTIAVVCSIVLTSLVWVCIIYQTRKKSEEYSVTN 831

  Fly  1076 HSTQLRPRSLADLGCSYDEANHRRLTVMSTPPSEQ--------------------------RCLE 1114
            ....:.|..:.....|....:.|:.||:.|....|                          .|.:
Mouse   832 TDETIVPPDVPSYLSSQGTLSDRQETVVRTEGGHQANGHIESNGVCLRDPSLFPEVDIHSTTCRQ 896

  Fly  1115 QGLTLSYLRQ-------TDLEAQQDHLSSKDSGTGSDAAVKRTLDDFEVAMPSHKHHTDDEEEEE 1172
            ..|.:.|.|:       .|..|.....:...|...||.:.........|...|.:..|...:|  
Mouse   897 PKLCVGYTREPWKVTEKADRTAAPHTTAHSGSAVCSDCSTDTAYHPQPVPRDSGQPGTASSQE-- 959

  Fly  1173 VEEVYEENEPPYIKHTYEVNYAEPEQHLFLQNNNHNYDG---GGIGVAGGV------NKMVPNAL 1228
                ..:::..|..|                   |.|.|   |...::||.      ::::|:  
Mouse   960 ----LRQHDREYSPH-------------------HPYSGTADGSHTLSGGSLYPSNHDRILPS-- 999

  Fly  1229 LRKCSAGASGSNYSS-----IQQCTTVDI 1252
            |:..:|.|.|:..||     :.:...:|:
Mouse  1000 LKNKAASADGNGDSSWTLAKLHEADCIDL 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR <293..642 CDD:443914 131/351 (37%)
leucine-rich repeat 293..316 CDD:275380 5/22 (23%)
leucine-rich repeat 317..338 CDD:275380 8/21 (38%)
leucine-rich repeat 339..362 CDD:275380 6/22 (27%)
leucine-rich repeat 363..386 CDD:275380 9/22 (41%)
leucine-rich repeat 387..410 CDD:275380 6/23 (26%)
leucine-rich repeat 411..434 CDD:275380 11/22 (50%)
leucine-rich repeat 435..457 CDD:275380 10/22 (45%)
leucine-rich repeat 458..481 CDD:275380 8/22 (36%)
leucine-rich repeat 482..505 CDD:275380 4/22 (18%)
leucine-rich repeat 506..529 CDD:275380 12/22 (55%)
leucine-rich repeat 530..553 CDD:275380 7/22 (32%)
leucine-rich repeat 554..577 CDD:275380 7/22 (32%)
leucine-rich repeat 578..604 CDD:275380 11/25 (44%)
leucine-rich repeat 607..630 CDD:275380 10/22 (45%)
leucine-rich repeat 631..652 CDD:275380 12/20 (60%)
LRRCT 665..712 CDD:214507 16/46 (35%)
Ig_3 717..816 CDD:464046 29/109 (27%)
Ig 835..924 CDD:472250 41/88 (47%)
Ig strand B 851..855 CDD:409353 3/3 (100%)
Ig strand C 864..868 CDD:409353 2/3 (67%)
Ig strand E 890..894 CDD:409353 1/3 (33%)
Ig strand F 904..909 CDD:409353 2/4 (50%)
Ig strand G 917..920 CDD:409353 0/2 (0%)
Ig_3 927..1013 CDD:464046 24/85 (28%)
Lrig1NP_032403.2 leucine-rich repeat 53..71 CDD:275380 6/17 (35%)
LRR 1 71..92 4/20 (20%)
leucine-rich repeat 72..95 CDD:275380 5/22 (23%)
LRR <73..430 CDD:443914 135/359 (38%)
LRR 2 95..116 8/20 (40%)
LRR 3 118..139 7/20 (35%)
LRR 4 142..163 8/20 (40%)
leucine-rich repeat 143..166 CDD:275380 9/22 (41%)
LRR 5 166..187 5/20 (25%)
leucine-rich repeat 167..190 CDD:275380 6/22 (27%)
leucine-rich repeat 191..214 CDD:275380 11/23 (48%)
LRR 6 191..212 10/21 (48%)
LRR 7 214..235 8/20 (40%)
leucine-rich repeat 215..238 CDD:275380 10/22 (45%)
LRR 8 238..259 9/20 (45%)
leucine-rich repeat 239..262 CDD:275380 8/22 (36%)
LRR 9 262..283 4/20 (20%)
leucine-rich repeat 263..286 CDD:275380 4/22 (18%)
LRR 10 286..307 11/20 (55%)
leucine-rich repeat 287..310 CDD:275380 12/22 (55%)
LRR 11 310..331 6/20 (30%)
leucine-rich repeat 311..334 CDD:275380 7/22 (32%)
LRR 12 334..355 7/20 (35%)
leucine-rich repeat 335..358 CDD:275380 7/22 (32%)
LRR 13 358..380 10/23 (43%)
leucine-rich repeat 359..383 CDD:275380 11/25 (44%)
LRR 14 385..406 7/20 (35%)
leucine-rich repeat 386..409 CDD:275380 10/22 (45%)
LRR 15 409..430 12/20 (60%)
leucine-rich repeat 410..433 CDD:275380 13/22 (59%)
LRRCT 444..492 CDD:214507 17/47 (36%)
Ig_3 496..583 CDD:464046 29/109 (27%)
IgI_LRIG1-like 602..692 CDD:409420 41/89 (46%)
Ig strand A 602..605 CDD:409420 1/2 (50%)
Ig strand A' 609..613 CDD:409420 0/3 (0%)
Ig strand B 616..625 CDD:409420 4/8 (50%)
Ig strand C 631..636 CDD:409420 2/4 (50%)
Ig strand C' 639..641 CDD:409420 1/1 (100%)
Ig strand D 649..653 CDD:409420 1/3 (33%)
Ig strand E 657..664 CDD:409420 3/6 (50%)
Ig strand F 670..678 CDD:409420 5/7 (71%)
Ig strand G 681..692 CDD:409420 5/10 (50%)
I-set 695..782 CDD:400151 27/98 (28%)
Ig strand B 712..716 CDD:409544 0/3 (0%)
Ig strand C 725..729 CDD:409544 0/3 (0%)
Ig strand E 748..752 CDD:409544 2/3 (67%)
Ig strand F 762..767 CDD:409544 1/4 (25%)
Ig strand G 775..778 CDD:409544 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 912..990 17/102 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1059..1091
Blue background indicates that the domain is not in the aligned region.

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