DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbk and gp5

DIOPT Version :10

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:XP_031758900.1 Gene:gp5 / 116411101 XenbaseID:XB-GENE-17346925 Length:615 Species:Xenopus tropicalis


Alignment Length:535 Identity:145/535 - (27%)
Similarity:243/535 - (45%) Gaps:54/535 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 CPKDCKC-LNVLFDCDKLHLERVP--VLPSYVQTLHLANNKLNDTTVLEIRNLLNLTKVSLKRNL 326
            ||..|.| |.....|....::.:.  :|||....:|:......:.|.....|:....::.|:.|.
 Frog    20 CPTLCNCDLKDAIICRGTSIKDIGSLLLPSNFTYIHIMETLATEITDKSFGNMPVTLRLRLEANH 84

  Fly   327 LEVIPK--FIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVH 389
            |..|.:  |.....||.|.|.:|.:.::.:....:|..|..|.|.:|.|.::..|.|....:|..
 Frog    85 LTSITRNAFKSFPHLKSLKLTDNKLKTLPAGMFDSLISLEQLFLDKNCLSSLHPNLFCCLQHLEE 149

  Fly   390 LILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQL-EINWSTFR 453
            |||:.|::|::.:.....|..|..|.||.|::|.||:.:|.:|.:||||.|..||| .|..|.|.
 Frog   150 LILNRNQLTSLPDELLKNLTKLISLNLSRNKISHLPMSIFSSLTKLKKLFLYDNQLVTITSSAFN 214

  Fly   454 GLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLF-NLTKLRHLNLSFNAIS 517
            .|..:.:|.|.||.|:.:....||.:.|::::.|:.|::..|. .||| :|.:|..|.|..|.:.
 Frog   215 KLGELLDLALYSNSIQFVAQDAFYHLPKLQSLKLSKNKLQLLP-YGLFLHLPQLSTLTLYDNPLK 278

  Fly   518 RIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDC-LHRLKTLNLAHN-RLQYLQENTFDCVKNLEE 580
            .:....:...::|..|.|.|..:... |..:.| |..|:.|.|..| :|..|.:..|..:.||.|
 Frog   279 ELPDVLFGKMENLTSLWLYNTHLTTI-PNFVFCNLTNLQLLVLTRNAQLDSLPKEAFSGLNNLLE 342

  Fly   581 LNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALASIQ 645
            |:|..|.||.|..|     .|:.|:.|.:|.|:.||||.:|......|..|:||:|.::.|.::.
 Frog   343 LSLHSNNLSSIDND-----VFQNLQLLEKLSLYSNNLKVLSENMFYNLTKLQILHLNNSNLHTLP 402

  Fly   646 VNAFEHMLRLNKLVFKSLNFICDCDLVWFQQWLKNRFPQQAEH-------AVCGYPEHLLDRHLK 703
            ...|:.:..|..:...|..:.|.|:|..|:.|.     ||.::       .||..|..|  .::.
 Frog   403 GQIFQELPSLQMVYLHSNPWACYCELTDFKMWF-----QQNQNKVYNPMSLVCDTPFTL--SNIS 460

  Fly   704 SLSSSELVCVDSPKPRVEQEPDDMLAVNAANITLECIASSPTAASLAAADELKIKWRHDN---QH 765
            .|::.|.:|               ....|....|:..|:|.|.:::.:.      :.::|   .:
 Frog   461 VLAAGESIC---------------HYTTAKQNNLDTTANSQTTSNIQST------YSYNNIEFTN 504

  Fly   766 VQERPAVHDGASTET 780
            |:.:|..:..:.|.|
 Frog   505 VKTQPISYTTSPTAT 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR <293..642 CDD:443914 108/354 (31%)
leucine-rich repeat 293..316 CDD:275380 3/22 (14%)
leucine-rich repeat 317..338 CDD:275380 5/22 (23%)
leucine-rich repeat 339..362 CDD:275380 6/22 (27%)
leucine-rich repeat 363..386 CDD:275380 7/22 (32%)
leucine-rich repeat 387..410 CDD:275380 7/22 (32%)
leucine-rich repeat 411..434 CDD:275380 10/22 (45%)
leucine-rich repeat 435..457 CDD:275380 12/22 (55%)
leucine-rich repeat 458..481 CDD:275380 7/22 (32%)
leucine-rich repeat 482..505 CDD:275380 7/23 (30%)
leucine-rich repeat 506..529 CDD:275380 4/22 (18%)
leucine-rich repeat 530..553 CDD:275380 7/23 (30%)
leucine-rich repeat 554..577 CDD:275380 7/23 (30%)
leucine-rich repeat 578..604 CDD:275380 10/25 (40%)
leucine-rich repeat 607..630 CDD:275380 9/22 (41%)
leucine-rich repeat 631..652 CDD:275380 6/20 (30%)
LRRCT 665..712 CDD:214507 13/53 (25%)
Ig_3 717..816 CDD:464046 10/67 (15%)
Ig 835..924 CDD:472250
Ig strand B 851..855 CDD:409353
Ig strand C 864..868 CDD:409353
Ig strand E 890..894 CDD:409353
Ig strand F 904..909 CDD:409353
Ig strand G 917..920 CDD:409353
Ig_3 927..1013 CDD:464046
gp5XP_031758900.1 LRR 75..374 CDD:443914 96/305 (31%)
leucine-rich repeat 75..98 CDD:275380 5/22 (23%)
leucine-rich repeat 99..122 CDD:275380 6/22 (27%)
leucine-rich repeat 123..146 CDD:275380 7/22 (32%)
leucine-rich repeat 147..170 CDD:275380 7/22 (32%)
leucine-rich repeat 171..194 CDD:275380 10/22 (45%)
leucine-rich repeat 195..218 CDD:275380 12/22 (55%)
leucine-rich repeat 219..242 CDD:275380 7/22 (32%)
leucine-rich repeat 243..266 CDD:275380 7/23 (30%)
leucine-rich repeat 267..290 CDD:275380 4/22 (18%)
leucine-rich repeat 291..314 CDD:275380 7/23 (30%)
leucine-rich repeat 315..337 CDD:275380 7/21 (33%)
leucine-rich repeat 340..363 CDD:275380 11/27 (41%)
LRR_8 364..421 CDD:404697 17/56 (30%)
leucine-rich repeat 364..387 CDD:275380 9/22 (41%)
leucine-rich repeat 388..409 CDD:275380 6/20 (30%)
PCC 393..>483 CDD:188093 21/111 (19%)
Blue background indicates that the domain is not in the aligned region.

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