DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbk and LRRN2

DIOPT Version :10

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_006329.2 Gene:LRRN2 / 10446 HGNCID:16914 Length:713 Species:Homo sapiens


Alignment Length:618 Identity:152/618 - (24%)
Similarity:228/618 - (36%) Gaps:140/618 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 AAAAAAKASNKYNIDCPKDCKCL-------------NVLFDCDKLHLERV-PVLPSYVQTLHLAN 300
            |.|.||.....:::.||..|.|.             ....||:.|.|..| |.||:..|||.|.:
Human    14 AGATAAVPVVPWHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPALPAGTQTLLLQS 78

  Fly   301 NKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPKFIGLSGLKHLVLANNHITSISSESLAALPLLRT 365
            |.:......|:..|.|||:                                              
Human    79 NSIVRVDQSELGYLANLTE---------------------------------------------- 97

  Fly   366 LDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFK 430
            ||||:|.........|.....|:.|.|..|::|.:.:||||.|.:|.:|.|::|:|..:..|.|.
Human    98 LDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFS 162

  Fly   431 NLNQLKKLALNFNQL---EINWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQI 492
            .|:.|.:|.||.|.|   :..|  |..|.:::.|.:..||:.|:.|..|..:..:.::.||...:
Human   163 GLSNLLRLHLNSNLLRAIDSRW--FEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNL 225

  Fly   493 SSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTL 557
            ..:|...|..|..|..|:...|.::|:.....|....|:.|||:.|.:....|.....:..||.|
Human   226 REISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKEL 290

  Fly   558 NLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGN-NLKQIS 621
            .|                .|:|||         :..|:.|..   .|.:|.:||:..| .|..|.
Human   291 GL----------------NNMEEL---------VSIDKFALV---NLPELTKLDITNNPRLSFIH 327

  Fly   622 TKAMSGLNNLEILNLGSNALASIQVNAFEHMLRLNKLVFKSLNFICDCDLVWFQ-QWLKNRF--P 683
            .:|...|..:|.|.|.:|||:::.....|.:..|.::........|||.:.|.. ...:.||  |
Human   328 PRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEP 392

  Fly   684 QQAEHAVCGYPEHLLDRHLKSLSSSELV--CVDSPKPRVEQEPDDMLAVNAANITLECIASSPTA 746
            |.   .:|..|..|....::.:...|:.  |:....||  ..|..:...:..::.|.|.|     
Human   393 QS---TLCAEPPDLQRLPVREVPFREMTDHCLPLISPR--SFPPSLQVASGESMVLHCRA----- 447

  Fly   747 ASLAAADELKIKW------RHDNQHVQERPAVHDGASTETQIRHDLSTNQTSIYGYLRLTNVTYE 805
               .|..|.:|.|      |....|...|..|:.                   .|.|.|..||.|
Human   448 ---LAEPEPEIYWVTPAGLRLTPAHAGRRYRVYP-------------------EGTLELRRVTAE 490

  Fly   806 SAGRYQCVVSNAFGTTYAQKFKISIGIHPTFLQ 838
            .||.|.||..|..|   |....:|:.:....||
Human   491 EAGLYTCVAQNLVG---ADTKTVSVVVGRALLQ 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR <293..642 CDD:443914 89/352 (25%)
leucine-rich repeat 293..316 CDD:275380 7/22 (32%)
leucine-rich repeat 317..338 CDD:275380 2/20 (10%)
leucine-rich repeat 339..362 CDD:275380 0/22 (0%)
leucine-rich repeat 363..386 CDD:275380 6/22 (27%)
leucine-rich repeat 387..410 CDD:275380 10/22 (45%)
leucine-rich repeat 411..434 CDD:275380 8/22 (36%)
leucine-rich repeat 435..457 CDD:275380 9/24 (38%)
leucine-rich repeat 458..481 CDD:275380 6/22 (27%)
leucine-rich repeat 482..505 CDD:275380 5/22 (23%)
leucine-rich repeat 506..529 CDD:275380 5/22 (23%)
leucine-rich repeat 530..553 CDD:275380 6/22 (27%)
leucine-rich repeat 554..577 CDD:275380 4/22 (18%)
leucine-rich repeat 578..604 CDD:275380 5/25 (20%)
leucine-rich repeat 607..630 CDD:275380 8/23 (35%)
leucine-rich repeat 631..652 CDD:275380 7/20 (35%)
LRRCT 665..712 CDD:214507 12/51 (24%)
Ig_3 717..816 CDD:464046 25/104 (24%)
Ig 835..924 CDD:472250 2/4 (50%)
Ig strand B 851..855 CDD:409353
Ig strand C 864..868 CDD:409353
Ig strand E 890..894 CDD:409353
Ig strand F 904..909 CDD:409353
Ig strand G 917..920 CDD:409353
Ig_3 927..1013 CDD:464046
LRRN2NP_006329.2 leucine-rich repeat 337..360 CDD:275378 7/22 (32%)
PCC 342..>420 CDD:188093 18/80 (23%)
leucine-rich repeat 361..373 CDD:275378 1/11 (9%)
Ig 422..514 CDD:472250 29/123 (24%)
Ig strand B 441..445 CDD:409353 1/3 (33%)
Ig strand C 454..458 CDD:409353 1/3 (33%)
Ig strand E 480..484 CDD:409353 2/3 (67%)
Ig strand F 494..499 CDD:409353 2/4 (50%)
Ig strand G 507..510 CDD:409353 0/2 (0%)
LRRNT 28..72 CDD:214470 12/43 (28%)
leucine-rich repeat 51..69 CDD:275380 7/17 (41%)
LRR 1 70..91 6/20 (30%)
leucine-rich repeat 71..94 CDD:275380 7/22 (32%)
LRR <85..>324 CDD:443914 75/314 (24%)
LRR 2 94..115 9/66 (14%)
leucine-rich repeat 95..118 CDD:275380 8/68 (12%)
LRR 3 118..139 8/20 (40%)
leucine-rich repeat 119..142 CDD:275380 10/22 (45%)
LRR 4 142..163 7/20 (35%)
leucine-rich repeat 143..166 CDD:275380 8/22 (36%)
LRR 5 166..187 8/22 (36%)
leucine-rich repeat 167..190 CDD:275380 9/24 (38%)
LRR 6 190..211 6/20 (30%)
leucine-rich repeat 191..214 CDD:275380 6/22 (27%)
LRR 7 214..235 4/20 (20%)
leucine-rich repeat 215..238 CDD:275380 5/22 (23%)
LRR 8 238..259 4/20 (20%)
leucine-rich repeat 239..262 CDD:275380 5/22 (23%)
LRR 9 262..283 6/20 (30%)
leucine-rich repeat 263..286 CDD:275380 6/22 (27%)
LRR 10 286..305 9/43 (21%)
leucine-rich repeat 287..311 CDD:275380 11/51 (22%)
LRR_8 310..371 CDD:404697 16/60 (27%)
LRR 11 311..333 7/21 (33%)
leucine-rich repeat 312..334 CDD:275380 7/21 (33%)
LRR 12 336..357 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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