DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbk and si:ch211-180f4.1

DIOPT Version :10

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_001373634.1 Gene:si:ch211-180f4.1 / 100144405 ZFINID:ZDB-GENE-080327-27 Length:744 Species:Danio rerio


Alignment Length:880 Identity:184/880 - (20%)
Similarity:317/880 - (36%) Gaps:268/880 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 CPKDCKCLN-------------VLFDCDKLHLERVPVLPSY-VQTLHLANNKLNDTTVLEIRNLL 315
            ||..|.|..             ...||::|||.|:|...|. .|.|.|.:|.::..| .::::|:
Zfish    29 CPAQCVCETRPWYTPQSVYHQAKTVDCNELHLSRIPWNISVDTQVLLLQSNNISRGT-SQLQSLV 92

  Fly   316 NLTKVSLKRNLLEVIPKFIGLSGLKHLV---LANNHITSISSESLAALPLLRTLDLSRNKLHTIE 377
            |||::.|.:|....|.. :||:.|..||   |..|.|..:....|..|..|..|.::.|::.:|.
Zfish    93 NLTELDLSQNHFTQIHD-VGLNNLTQLVTLYLEENQIKELPDMCLKDLVSLEELYINHNQISSIG 156

  Fly   378 LNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNF 442
            .|:|....||:.|.|:.|::..::.|.|.:|.||..|.:..|     ||...:::|         
Zfish   157 PNAFSGLGNLLRLHLNSNKLVAIDSHWFESLPNLEILMIGEN-----PILGLQDMN--------- 207

  Fly   443 NQLEINWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLR 507
                     |..|..:.:|.|....:|.:.:|.|..:..:|::....|:::::.::.|..|..|:
Zfish   208 ---------FHPLTKLHSLVLAGMGLREIPEGAFQGLEYLESLSFFDNKLTAVPKKALRVLPSLK 263

  Fly   508 HLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTF 572
            .|:|:.|.|.||:...::....||.|.|:|                       ...|..::..:|
Zfish   264 FLDLNKNPIVRIQEGDFQDFPHLEELSLNN-----------------------MEELVAVERGSF 305

  Fly   573 DCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLG 637
            ..:..:.:|.|..|...:.|:    .|.|..:|.||.|.:|.|:|..:..:.:|...||:.::|.
Zfish   306 SNLPQMAKLELYNNPHLFFID----RAAFLKMRGLRTLLIHNNDLTLLPHEIVSAFPNLDEISLH 366

  Fly   638 SNALASIQVNAFEHMLRLNKLVFKSLNFICDCDLVW-----FQQWLKNRFPQQAEHAVCGYPEHL 697
            ||.|.                        |||...|     .|..||...||   ..:|..|:||
Zfish   367 SNPLR------------------------CDCLNNWGPVLGNQSSLKVLEPQ---ITLCASPQHL 404

  Fly   698 LDRHLKSLSSSELVCVDSPKPRVEQEPDDMLAVNAANITLECIASSPTAASLAAADELKIKWRHD 762
            :.:.|:.:.|:..                   ..|:|..|..|                      
Zfish   405 VGQALQDVVSASW-------------------NGASNTCLPLI---------------------- 428

  Fly   763 NQHVQERPAVHDGASTETQIRHDLSTNQTSIYGYLRLTNVTYESAGRYQCVVSNAFGTTYAQKFK 827
            :||                                                   ||         
Zfish   429 SQH---------------------------------------------------AF--------- 433

  Fly   828 ISIGIHPTFLQVPSNLTLDAGEMARLVCSASGDPTPEIALQKFGGSEF------PAATE------ 880
                        |..|.:..|::..|.|.|..||.|:.......|.:.      |::.|      
Zfish   434 ------------PPQLNVTLGQLLTLDCWAVADPAPQFYWVTPTGDKVTSEAVSPSSNEGGGTPK 486

  Fly   881 -RRLQVIREENAFLITNAKPSDSGIYTCTALSAAGEIKVNATLVVNDKPQPSIPLVH----QEVV 940
             .|:|   ::.|..|.:.:|.|:|:|||.|.:|.|....:.::.|:.:   |....|    ...|
Zfish   487 KHRMQ---DQGALEIPHIEPEDTGLYTCVAWNAEGADTRSVSVYVDKR---SWNGAHHFGGHHGV 545

  Fly   941 VGRTCVLQCLSETANA-DFELE---HPHR----------EWFK-----ENKPIHISPTAP-DGDR 985
            |..|..|..|::|.:| ...||   ||:.          :|..     :|..|..:...| |...
Zfish   546 VNTTGSLVILAKTVHAQSVVLEWKMHPYAIPSNHEAGQPKWLSATVKIDNPQISYTAMVPVDVQE 610

  Fly   986 YYFSN---NKELLVILNAQSNDAGHFRC-EITDNSRTFTLQSELVVVKENLNWVVLLVGIITVTV 1046
            |..::   :.|..|.|.....:.....| .:|....:|.:  |:|....|:....::..:..:.:
Zfish   611 YNLTHLLPSTEYQVCLTMAGTEQTQHSCINVTTKEASFAV--EMVAQPTNVALAAVMGSMFAICI 673

  Fly  1047 ICVVVDCCIIWCTLRYQKKKLRMSLAA-ERHSTQL 1080
            :.::|    .:...|.::|....||.. .:|:|.:
Zfish   674 MALLV----FYMGRRMKQKSCHHSLKKYMQHTTSI 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR <293..642 CDD:443914 87/351 (25%)
leucine-rich repeat 293..316 CDD:275380 6/22 (27%)
leucine-rich repeat 317..338 CDD:275380 7/20 (35%)
leucine-rich repeat 339..362 CDD:275380 8/25 (32%)
leucine-rich repeat 363..386 CDD:275380 6/22 (27%)
leucine-rich repeat 387..410 CDD:275380 7/22 (32%)
leucine-rich repeat 411..434 CDD:275380 5/22 (23%)
leucine-rich repeat 435..457 CDD:275380 2/21 (10%)
leucine-rich repeat 458..481 CDD:275380 5/22 (23%)
leucine-rich repeat 482..505 CDD:275380 4/22 (18%)
leucine-rich repeat 506..529 CDD:275380 7/22 (32%)
leucine-rich repeat 530..553 CDD:275380 5/22 (23%)
leucine-rich repeat 554..577 CDD:275380 2/22 (9%)
leucine-rich repeat 578..604 CDD:275380 6/25 (24%)
leucine-rich repeat 607..630 CDD:275380 7/22 (32%)
leucine-rich repeat 631..652 CDD:275380 5/20 (25%)
LRRCT 665..712 CDD:214507 15/51 (29%)
Ig_3 717..816 CDD:464046 6/98 (6%)
Ig 835..924 CDD:472250 25/101 (25%)
Ig strand B 851..855 CDD:409353 1/3 (33%)
Ig strand C 864..868 CDD:409353 0/3 (0%)
Ig strand E 890..894 CDD:409353 1/3 (33%)
Ig strand F 904..909 CDD:409353 3/4 (75%)
Ig strand G 917..920 CDD:409353 0/2 (0%)
Ig_3 927..1013 CDD:464046 23/113 (20%)
si:ch211-180f4.1NP_001373634.1 LRR 51..370 CDD:443914 95/370 (26%)
leucine-rich repeat 51..70 CDD:275380 8/18 (44%)
leucine-rich repeat 71..93 CDD:275380 6/22 (27%)
leucine-rich repeat 94..117 CDD:275380 8/23 (35%)
leucine-rich repeat 118..141 CDD:275380 7/22 (32%)
leucine-rich repeat 142..165 CDD:275380 6/22 (27%)
leucine-rich repeat 166..189 CDD:275380 7/22 (32%)
leucine-rich repeat 190..213 CDD:275380 8/45 (18%)
leucine-rich repeat 214..237 CDD:275380 5/22 (23%)
leucine-rich repeat 238..261 CDD:275380 4/22 (18%)
leucine-rich repeat 262..285 CDD:275380 7/22 (32%)
leucine-rich repeat 286..310 CDD:275380 7/46 (15%)
leucine-rich repeat 311..330 CDD:275380 5/22 (23%)
leucine-rich repeat 336..359 CDD:275378 7/22 (32%)
PCC 341..>412 CDD:188093 24/97 (25%)
leucine-rich repeat 360..372 CDD:275378 5/35 (14%)
IG_like 434..528 CDD:214653 25/96 (26%)
Ig strand B 445..449 CDD:409353 1/3 (33%)
Ig strand C 458..462 CDD:409353 0/3 (0%)
Ig strand E 494..498 CDD:409353 1/3 (33%)
Ig strand F 508..513 CDD:409353 3/4 (75%)
Ig strand G 521..524 CDD:409353 0/2 (0%)

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