DRSC/TRiP Functional Genomics Resources

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Protein Alignment CysRS and Cars2

DIOPT Version :9

Sequence 1:NP_611087.1 Gene:CysRS / 36784 FlyBaseID:FBgn0027091 Length:741 Species:Drosophila melanogaster
Sequence 2:XP_011240384.1 Gene:Cars2 / 71941 MGIID:1919191 Length:619 Species:Mus musculus


Alignment Length:739 Identity:222/739 - (30%)
Similarity:317/739 - (42%) Gaps:251/739 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKRGQPAWQAPEAVDRPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISF 65
            :.:||: :||.|:..| ..:::.||||.:||..:....:.|:||||||||||.:|:|||.||:.|
Mouse    20 LGRRGR-SWQRPQGQD-TGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRF 82

  Fly    66 DILRRILSDYFGYNIHYVMNITDIDDKIIRRARQNHLFDEYAAEAQKLPLDELLGQQKEVLQRFQ 130
            ||:||||:..||.|:...|:|||:|||||:||.:                               
Mouse    83 DIIRRILTRVFGCNVVMAMSITDVDDKIIKRANE------------------------------- 116

  Fly   131 DTCAKNTDPDKKIMLDKTLQRMNDAVEALTKAVGKGDEREISEKRLLYLNEAKDPISDWLDSLKG 195
                                 ||     :|.|                                 
Mouse   117 ---------------------MN-----VTPA--------------------------------- 122

  Fly   196 AQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAYA-ANNS 259
                      :|...:|::|..||.:|.:|||.|..||:|.:|||:.||:.||.:|.||: |..|
Mouse   123 ----------SLASLFEEEFKQDMAALKVLPPTVYLRVTENIPQIIAFIEGIIAHGHAYSTATGS 177

  Fly   260 VYFDVNGFDKREKHHYAKL---VPEAYGDTKSLQEGEGDLSIAEDRLSEKRSANDFALWKASKAG 321
            ||||::.  :.:|  |.||   ||.|      ..|..||        |:||.::|||||||:|..
Mouse   178 VYFDLHA--RGDK--YGKLVNTVPSA------TAEPAGD--------SDKRHSSDFALWKAAKPQ 224

  Fly   322 EPWWDSPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYF 386
            |.:|.||||.||||||||||.|||::||...||||||:||.||||:||:||||......:|..||
Mouse   225 EVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLAFPHHENEIAQSEVFHQCQQWGNYF 289

  Fly   387 LHTGHLTIAGC--KMSKSLKNFVTIQEA------------------------------------- 412
            ||:|||.:.|.  ||||||||::||::.                                     
Mouse   290 LHSGHLHVKGTEEKMSKSLKNYITIKDCRLSGRSLLDSCLHCCFDSIAEPSRGPKGKQDLPLRCD 354

  Fly   413 ------------------------------LKKHSATQLRLAFLLHSWKDTLDYSENTMEMATQY 447
                                          ||..|....||..|..:::..::||::|:..|...
Mouse   355 LHGGTTDPVHILHKGLLNRVTQLPFWSKDFLKTFSPDVFRLFCLRTNYRSAIEYSDSTLVEAKHL 419

  Fly   448 EKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQKKFSNAQVQVHASLCDNIDTRSALDAI 512
            ...|..|   |:|...:|     :.|.......|..|.::.::.:..|.|:|.::.||..|::.|
Mouse   420 LLGLASF---VEDARAYV-----KGQLTCGPVEEDVLWERLTSTKKAVKAALANDFDTPRAVNTI 476

  Fly   513 RELVSVSNVYIRDNKTRLNSLLLRNVATYITDLLHVFGAISGPR-----GGI------GFPVSGG 566
            .:||..:|..:|                      .|....||||     |.|      .|...|.
Mouse   477 LDLVHHANRQLR----------------------AVSKEASGPRSPTVFGAIISYVEQFFETVGI 519

  Fly   567 SGA--QAAGADLETTVLP-YVQSLAEFRYLVREQA-------------KTLKAFDILKLCDDLRD 615
            |.|  |....|..|..|. .|..|..||..||:.|             :..:...:|:.||.||.
Mouse   520 SLANRQCVSGDSSTVTLRCVVDELVRFRLKVRQYALDTPGAAGEARKRQLQERQPLLEACDTLRQ 584

  Fly   616 NVLPNLGVRLEDKDIGKYAVKLVD 639
            :::.: |:.::|:.......:|:|
Mouse   585 DLVTH-GINVKDRGSAASTWELLD 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CysRSNP_611087.1 PTZ00399 2..737 CDD:240402 222/738 (30%)
CysRS_core 21..437 CDD:173899 162/488 (33%)
Cars2XP_011240384.1 PTZ00399 27..614 CDD:240402 220/731 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54140
OrthoDB 1 1.010 - - D480663at33208
OrthoFinder 1 1.000 - - FOG0000992
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100332
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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