DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CysRS and cars-1

DIOPT Version :9

Sequence 1:NP_611087.1 Gene:CysRS / 36784 FlyBaseID:FBgn0027091 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_491013.1 Gene:cars-1 / 171821 WormBaseID:WBGene00000800 Length:909 Species:Caenorhabditis elegans


Alignment Length:747 Identity:373/747 - (49%)
Similarity:498/747 - (66%) Gaps:19/747 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KRGQPAWQAPE-AVDRPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFD 66
            ||.|..|..|: |...|:|.::||||||||.|||.:|..|.||.|||||||:|||||||||:|.|
 Worm   166 KRVQKHWDQPKNATPPPQLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLD 230

  Fly    67 ILRRILSDYFGYNIHYVMNITDIDDKIIRRARQNHLFDEYAAEAQKLPLDELLGQQKEVLQRFQD 131
            ||||:..|||||::.::|||||:|||||:||||:||...|..|:|..|:.::.......|:.|:.
 Worm   231 ILRRVFRDYFGYDVEFIMNITDVDDKIIKRARQSHLLKSYFNESQAPPVMKVCEDVVAALEHFKT 295

  Fly   132 TCAKNTDPDKKIMLDKTLQRMNDAVEALTKAVGKGDEREISEKRLLYLNEAKDPISDWLDSLKGA 196
            ......|||||.|.:..::::.....||.:|:...|.....|.:...|||::|.:|:|||...|.
 Worm   296 KFETEMDPDKKKMFEVMIKKVQQQSSALEEAMKAQDSIATEEAKGRLLNESRDVLSEWLDHNHGK 360

  Fly   197 QINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAYAA-NNSV 260
            .:.|::||:.|.:.:|.:|..||..||:||.|||||||||||:::|:::|||.||.|||| :.||
 Worm   361 DVRDHSVFDDLAKTYEKEFLADMARLNVLPVDVLTRVSEYVPEVITYVKKIISNGYAYAAEDGSV 425

  Fly   261 YFDVNGFDKREKHHYAKLVPEAYGD-----TKSLQEGEGDLSIAEDRLSEKRSANDFALWKASKA 320
            |||...|::..||.||||||||||:     .|:::|.||:||:::|||..|||.|||||||:||.
 Worm   426 YFDTKAFEQNPKHFYAKLVPEAYGEDSEQLLKNMKESEGELSMSDDRLKSKRSPNDFALWKSSKD 490

  Fly   321 GEPWWDSPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKY 385
            |||:|.|.||.||||||||||.|:|.|.|...|||.||.||||||||||:||.||.:::..||.|
 Worm   491 GEPFWPSEWGNGRPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNY 555

  Fly   386 FLHTGHLTIAGCKMSKSLKNFVTIQEALKKHSATQLRLAFLLHSWKDTLDYSENTMEMATQYEKF 450
            |||.|.|.|.|.|||||||||:||::||:.::..||||.||:|:|.|.||||.:|||.|.|:||.
 Worm   556 FLHCGTLRIQGMKMSKSLKNFITIRKALEDYTPRQLRLLFLMHNWADVLDYSSSTMERALQFEKI 620

  Fly   451 LNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQKKFSNAQVQVHASLCDNIDTRSALDAIREL 515
            .|||||.|||..|.....:....:..:...|..|.::|...:.:||.:|||::||||.::..|||
 Worm   621 TNEFFLLVKDFLRRHYKPDRSEGYQKFQGKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFREL 685

  Fly   516 VSVSNVYIRDNKTR---LNSLLLRNVATYITDLLHVFGAISGPRGGIGFPVS----GGSGAQAAG 573
            :|:.|.||.:.:..   .|.|||||:|.|||:||.:||||......||| ||    .|.|| :..
 Worm   686 ISLGNAYIVEKEKEGHVPNCLLLRNIAAYITNLLKIFGAIPQSNQEIGF-VSEDECNGEGA-STS 748

  Fly   574 ADLETTVLPYVQSLAEFRYLVREQAKTLKAFDILKLCDDLRDNVLPNLGVRLEDKDIGKYAVKLV 638
            .:.|..|:||:.:||:||..||..||..|...||:.||.|||..|..|||||||:: |:..||||
 Worm   749 FNKEAVVMPYLDALAQFREKVRLIAKEHKVNGILEECDTLRDKTLTELGVRLEDRN-GQTVVKLV 812

  Fly   639 DRDSLLREREAKLAAEAEKAAEKERKKQAAAEAAAAKEAQRRVNPKEMFL--AETEKYSAFDENG 701
            ||.:||||:|.|...:..|..||..|:|.|.|.|..:.|.:::.|:|:|.  ....|||.|||.|
 Worm   813 DRATLLREQEQKDTEKKRKDKEKADKEQKAREKADKEAAAKKIKPEELFKQGEHVGKYSKFDERG 877

  Fly   702 LPTHDKEGKEVSKGQIKKLQKLQQQQEQRYNE 733
            :|||..:|.|::|.|||||:|:.:.|:::|.:
 Worm   878 VPTHLADGTEITKSQIKKLEKVYEAQKKKYQQ 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CysRSNP_611087.1 PTZ00399 2..737 CDD:240402 373/747 (50%)
CysRS_core 21..437 CDD:173899 230/421 (55%)
cars-1NP_491013.1 PTZ00399 171..909 CDD:240402 370/740 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158952
Domainoid 1 1.000 476 1.000 Domainoid score I205
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1328
Inparanoid 1 1.050 717 1.000 Inparanoid score I331
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54140
OrthoDB 1 1.010 - - D480663at33208
OrthoFinder 1 1.000 - - FOG0000992
OrthoInspector 1 1.000 - - oto20189
orthoMCL 1 0.900 - - OOG6_100332
Panther 1 1.100 - - LDO PTHR10890
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1431
SonicParanoid 1 1.000 - - X4186
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.940

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