DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Got1 and got2a

DIOPT Version :9

Sequence 1:NP_725534.1 Gene:Got1 / 36782 FlyBaseID:FBgn0001124 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_998544.1 Gene:got2a / 406688 ZFINID:ZDB-GENE-040426-2703 Length:428 Species:Danio rerio


Alignment Length:409 Identity:198/409 - (48%)
Similarity:264/409 - (64%) Gaps:3/409 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLQNFQLSTMSIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEI 77
            :|...||...|.:.:|..||...:..:|:|||.|:||.|:||.|||||.|.|.|:||..|||.|.
Zfish    19 VLAVLQLRASSWWTEVQMGPPDPILGVTEAFKRDTNPKKMNLGVGAYRDDQGKPFVLSSVRKAEA 83

  Fly    78 SIASDEQVNHEYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFLHTQL 142
            .||: ::::.||||:.||..|:.|..:|.||.|:..:|..|:..||||||||:||:.|:|:....
Zfish    84 QIAA-KKLDKEYLPIGGLADFSKACVQLALGPDNEVLKSGRSITVQTISGTGSLRIGANFVSRFH 147

  Fly   143 NRN-VVYYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGAVIILHACA 206
            |.: .||...|:|.||..:|.|||. .:|:|.|::......:.|..|.|::..|..:||:|||||
Zfish   148 NASRDVYLPKPSWGNHTPVFRDAGM-QLKAYTYYEPKTCGFNLKGALDDISKIPEKSVILLHACA 211

  Fly   207 HNPTGIDPTQEQWTELADLMEKKKLFPLFDSAYQGFASGDPDRDAWAARYFVQRGFELFICQSFA 271
            |||||:||..|||.|:|.|::|:.|...||.|||||||||.||||||.|||:::|..:.:.||||
Zfish   212 HNPTGVDPRPEQWKEMAALIKKRNLLVFFDMAYQGFASGDIDRDAWAVRYFIEQGHNILLSQSFA 276

  Fly   272 KNFGLYCERTGNLAVVQKNGATKAAVHSQLTLLIRGQYSNPPAYGARIVSKVLNTPELRKEWMAS 336
            ||.|||.||.|...||.|:......|.|||.:|||..|||||..||||.:.:||||||.|||:..
Zfish   277 KNMGLYGERVGGFTVVCKDAEEAKRVESQLKILIRPIYSNPPMNGARIAATILNTPELYKEWLQE 341

  Fly   337 IQAMSSRIREMRTALRDKLVALGTPGTWDHIVNQIGMFSYTGLNESHVRVLIDQYHIYLLKTGRI 401
            ::.|:.||..||..|...|...|:...|.|:.:|||||.:|||....|..||:::.||:.|.|||
Zfish   342 VKGMADRIIRMREMLVSNLKKEGSTHNWQHVTDQIGMFCFTGLKPEQVERLINEFSIYMTKDGRI 406

  Fly   402 SMSGLNKGNVEYVAKAIHA 420
            |::|:...||||:|.||||
Zfish   407 SVAGVTSANVEYLAHAIHA 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Got1NP_725534.1 PTZ00376 21..423 CDD:240390 195/401 (49%)
Aminotran_1_2 49..418 CDD:278580 181/369 (49%)
got2aNP_998544.1 PLN02397 26..428 CDD:215222 195/402 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1448
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62835
OrthoDB 1 1.010 - - D1104596at2759
OrthoFinder 1 1.000 - - FOG0000707
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100337
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2019
SonicParanoid 1 1.000 - - X428
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.760

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