DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Got1 and got1

DIOPT Version :9

Sequence 1:NP_725534.1 Gene:Got1 / 36782 FlyBaseID:FBgn0001124 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_998222.1 Gene:got1 / 406330 ZFINID:ZDB-GENE-040426-2003 Length:410 Species:Danio rerio


Alignment Length:407 Identity:224/407 - (55%)
Similarity:290/407 - (71%) Gaps:5/407 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MSIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEISIASDEQVN 86
            |||:.:||:...:.||.||..|::|.:..||||.|||||||...|||||||||.|..||.|..:|
Zfish     1 MSIFGEVPQAAPVAVFKLTADFREDQDQKKVNLGVGAYRTDECQPWVLPVVRKVEKMIADDHSLN 65

  Fly    87 HEYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFLH-----TQLNRNV 146
            |||||:.||..|.::|:::.||.|||||||||...||.:.|||||::.|:||.     |...:..
Zfish    66 HEYLPILGLPEFRSSASKIALGEDSPAIKENRVGAVQCLGGTGALKIGAEFLRRWYNGTDNTKTP 130

  Fly   147 VYYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGAVIILHACAHNPTG 211
            ||.|.||||||:.:|.:|||..::.|:|||..||.||....|.|:..||..::.:||||||||||
Zfish   131 VYVSAPTWENHNAVFSNAGFEDIRPYKYWDPVKRGLDLAGFLGDMESAPDHSIFVLHACAHNPTG 195

  Fly   212 IDPTQEQWTELADLMEKKKLFPLFDSAYQGFASGDPDRDAWAARYFVQRGFELFICQSFAKNFGL 276
            .||||:||.::|::|::|.||..||||||||||||.::||||.||||.:|||||..|||:|||||
Zfish   196 TDPTQDQWKQIAEVMKRKNLFAFFDSAYQGFASGDLEKDAWAVRYFVSQGFELFCAQSFSKNFGL 260

  Fly   277 YCERTGNLAVVQKNGATKAAVHSQLTLLIRGQYSNPPAYGARIVSKVLNTPELRKEWMASIQAMS 341
            |.||.|||.||.|:......|.||:..::|..:||||:.|||:|:..||||||..||.|:::.|:
Zfish   261 YNERVGNLTVVAKDQDNVNRVLSQMEKIVRITWSNPPSQGARLVAITLNTPELFAEWKANVKTMA 325

  Fly   342 SRIREMRTALRDKLVALGTPGTWDHIVNQIGMFSYTGLNESHVRVLIDQYHIYLLKTGRISMSGL 406
            .|:..||..|::||.||||||||:||..||||||:||||...|..:|.:.||||:.:|||:|.||
Zfish   326 DRVLLMRAQLKEKLKALGTPGTWEHITEQIGMFSFTGLNPKQVEYMIKEKHIYLMASGRINMCGL 390

  Fly   407 NKGNVEYVAKAIHAAVT 423
            ...|::|||::||.|||
Zfish   391 TSKNIDYVAESIHEAVT 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Got1NP_725534.1 PTZ00376 21..423 CDD:240390 222/405 (55%)
Aminotran_1_2 49..418 CDD:278580 208/373 (56%)
got1NP_998222.1 PTZ00376 1..409 CDD:240390 224/407 (55%)
Aminotran_1_2 29..402 CDD:278580 208/372 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576004
Domainoid 1 1.000 438 1.000 Domainoid score I535
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1571
Inparanoid 1 1.050 470 1.000 Inparanoid score I1483
OMA 1 1.010 - - QHG62835
OrthoDB 1 1.010 - - D1104596at2759
OrthoFinder 1 1.000 - - FOG0000707
OrthoInspector 1 1.000 - - oto41669
orthoMCL 1 0.900 - - OOG6_100337
Panther 1 1.100 - - LDO PTHR11879
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X428
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.910

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