DRSC/TRiP Functional Genomics Resources

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Protein Alignment Got1 and got2b

DIOPT Version :9

Sequence 1:NP_725534.1 Gene:Got1 / 36782 FlyBaseID:FBgn0001124 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_956283.1 Gene:got2b / 335974 ZFINID:ZDB-GENE-030131-7917 Length:428 Species:Danio rerio


Alignment Length:409 Identity:201/409 - (49%)
Similarity:259/409 - (63%) Gaps:7/409 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LQNFQLSTMSIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEIS 78
            |.:..:...|.:.:|..||...:..:|:|||.|:|..|:||.|||||.|.|.|:||..|||.|..
Zfish    20 LASLPIRASSWWTEVQMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAESL 84

  Fly    79 IASDEQVNHEYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFL---HT 140
            ||| :.::.|||.:.||..|..|..||.||.||..:|..|:..||||||||:|||.|:||   ||
Zfish    85 IAS-KALDKEYLGIVGLGDFNKACAELALGQDSDVLKSKRSITVQTISGTGSLRVGANFLSRFHT 148

  Fly   141 QLNRNVVYYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGAVIILHAC 205
             :.|: ||...|:|.||..||.|||. .:|:|||:|......||...|.|::..|..:||:||||
Zfish   149 -VARD-VYLPKPSWGNHTPIFRDAGM-QLKAYRYYDPATCGFDFTGALDDISKIPQNSVILLHAC 210

  Fly   206 AHNPTGIDPTQEQWTELADLMEKKKLFPLFDSAYQGFASGDPDRDAWAARYFVQRGFELFICQSF 270
            ||||||:||..|||.||:.:::::||.|.||.|||||||||.||||||.|||:::|..:.:.|||
Zfish   211 AHNPTGVDPRPEQWKELSAVIKERKLLPFFDMAYQGFASGDIDRDAWAVRYFIEQGHNILLSQSF 275

  Fly   271 AKNFGLYCERTGNLAVVQKNGATKAAVHSQLTLLIRGQYSNPPAYGARIVSKVLNTPELRKEWMA 335
            |||.|||.||.|...||..:......|.|||.:|||..|||||..||||.|.:|.|||||..|:.
Zfish   276 AKNMGLYGERVGGFTVVCGDAEEAKRVESQLKILIRPIYSNPPMNGARIASTILTTPELRSTWLE 340

  Fly   336 SIQAMSSRIREMRTALRDKLVALGTPGTWDHIVNQIGMFSYTGLNESHVRVLIDQYHIYLLKTGR 400
            .::.|:.||..||..|...|...|:...|.|:.:|||||.:|||....|..|...:.:|:.|.||
Zfish   341 EVKGMADRIIRMREMLVTNLKKEGSTHNWQHVTDQIGMFCFTGLKPEQVERLTKDFSVYMTKDGR 405

  Fly   401 ISMSGLNKGNVEYVAKAIH 419
            ||::|:..|||||:|.|||
Zfish   406 ISVAGVTSGNVEYLAHAIH 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Got1NP_725534.1 PTZ00376 21..423 CDD:240390 200/402 (50%)
Aminotran_1_2 49..418 CDD:278580 187/371 (50%)
got2bNP_956283.1 PLN02397 26..428 CDD:215222 200/403 (50%)
Aminotran_1_2 55..423 CDD:278580 187/371 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1448
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62835
OrthoDB 1 1.010 - - D1104596at2759
OrthoFinder 1 1.000 - - FOG0000707
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100337
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2019
SonicParanoid 1 1.000 - - X428
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.760

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