DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Got1 and Got2

DIOPT Version :9

Sequence 1:NP_725534.1 Gene:Got1 / 36782 FlyBaseID:FBgn0001124 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_722745.1 Gene:Got2 / 33373 FlyBaseID:FBgn0001125 Length:431 Species:Drosophila melanogaster


Alignment Length:415 Identity:191/415 - (46%)
Similarity:264/415 - (63%) Gaps:9/415 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NYPG--LLQNFQLSTMSIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPV 71
            |.||  :.:..::||.  :::|..||...:..:|:|||.|:||.|:||..||||.|...|:|||.
  Fly    18 NDPGERMCRANRVSTW--FSEVQMGPPDAILGVTEAFKKDTNPKKINLGAGAYRDDNTQPFVLPS 80

  Fly    72 VRKTEISIASDEQVNHEYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAAD 136
            ||:.|..:.| ..::.||..:.|:..|.|.|.||.||..|..:........|:||||||||:.|.
  Fly    81 VREAEKRVVS-RSLDKEYATIIGIPEFYNKAIELALGKGSKRLAAKHNVTAQSISGTGALRIGAA 144

  Fly   137 FL--HTQLNRNVVYYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGAV 199
            ||  ..|.||. :|..:|:|.||..||..||. .|..|||:|::...|||..::.||...|..::
  Fly   145 FLAKFWQGNRE-IYIPSPSWGNHVAIFEHAGL-PVNRYRYYDKDTCALDFGGLIEDLKKIPEKSI 207

  Fly   200 IILHACAHNPTGIDPTQEQWTELADLMEKKKLFPLFDSAYQGFASGDPDRDAWAARYFVQRGFEL 264
            ::||||||||||:|||.|||.|::.|::|:.|:|..|.||||||:||.||||.|.|.|...|.:.
  Fly   208 VLLHACAHNPTGVDPTLEQWREISALVKKRNLYPFIDMAYQGFATGDIDRDAQAVRTFEADGHDF 272

  Fly   265 FICQSFAKNFGLYCERTGNLAVVQKNGATKAAVHSQLTLLIRGQYSNPPAYGARIVSKVLNTPEL 329
            .:.||||||.|||.||.|...|:..:....|.|.||:.:||||.|||||.:||||.:::||..:|
  Fly   273 CLAQSFAKNMGLYGERAGAFTVLCSDEEEAARVMSQVKILIRGLYSNPPVHGARIAAEILNNEDL 337

  Fly   330 RKEWMASIQAMSSRIREMRTALRDKLVALGTPGTWDHIVNQIGMFSYTGLNESHVRVLIDQYHIY 394
            |.:|:..::.|:.||.::||.|:|.|:.||:...|||||||||||.:|||....|:.||..:.:|
  Fly   338 RAQWLKDVKLMADRIIDVRTKLKDNLIKLGSSQNWDHIVNQIGMFCFTGLKPEQVQKLIKDHSVY 402

  Fly   395 LLKTGRISMSGLNKGNVEYVAKAIH 419
            |...||:||:|:...||||:|::||
  Fly   403 LTNDGRVSMAGVTSKNVEYLAESIH 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Got1NP_725534.1 PTZ00376 21..423 CDD:240390 187/401 (47%)
Aminotran_1_2 49..418 CDD:278580 175/370 (47%)
Got2NP_722745.1 AAT_I 21..431 CDD:302748 189/412 (46%)
Aminotran_1_2 58..426 CDD:278580 175/370 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442234
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1448
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104596at2759
OrthoFinder 1 1.000 - - FOG0000707
OrthoInspector 1 1.000 - - mtm9758
orthoMCL 1 0.900 - - OOG6_100337
Panther 1 1.100 - - P PTHR11879
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X428
98.750

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