DRSC/TRiP Functional Genomics Resources

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Protein Alignment Got1 and Got1l1

DIOPT Version :9

Sequence 1:NP_725534.1 Gene:Got1 / 36782 FlyBaseID:FBgn0001124 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_001014025.2 Gene:Got1l1 / 306540 RGDID:1307172 Length:404 Species:Rattus norvegicus


Alignment Length:405 Identity:148/405 - (36%)
Similarity:226/405 - (55%) Gaps:7/405 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LSTMSIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEISIASDE 83
            ::::|::.|||....:| .:|.:.::.|.:..|:.|:.....|:.|.|||..|||||.:.||.|.
  Rat     1 MTSLSVFRDVPIAQKLE-GSLLKIYRQDDSSVKMFLAYKVCMTEGGHPWVSLVVRKTRLQIAEDP 64

  Fly    84 QVNHEYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFLHT-QLNRNVV 147
            .:|:||||:.||::|..|:.||:.|..|.||.|.|..||..:..:||.::.|.||.. :.|...|
  Rat    65 SLNYEYLPLAGLKSFIQASLELLFGKHSQAIVEKRVGGVHIVGESGAFQLGAQFLKIWRKNLKTV 129

  Fly   148 YYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGAVIILHACAHNPTGI 212
            ...:...|....||.|.|| ||..|..|:......|....:..|...|.|:::::    .|.:..
  Rat   130 CIISCQNEQCGLIFRDMGF-TVYEYSVWNSTDLCSDPSIFVEVLQHIPAGSILVI----GNISDC 189

  Fly   213 DPTQEQWTELADLMEKKKLFPLFDSAYQGFASGDPDRDAWAARYFVQRGFELFICQSFAKNFGLY 277
            ..||.|||:|..:::.|::||.||...||.::||.:.|:...::||..|||.|..||.:||||:|
  Rat   190 RFTQNQWTKLMSIIKSKQIFPFFDIPCQGLSTGDLEEDSKFLQHFVSLGFEFFCSQSLSKNFGIY 254

  Fly   278 CERTGNLAVVQKNGATKAAVHSQLTLLIRGQYSNPPAYGARIVSKVLNTPELRKEWMASIQAMSS 342
            .|..|.|.|...:......|.|||...::..:.||||.||||::.:|..|.|..||..|::.:..
  Rat   255 DEGVGILVVAALSNQHLLCVISQLMDYVQALWGNPPATGARIITSILCNPALFGEWKQSLKGVVE 319

  Fly   343 RIREMRTALRDKLVALGTPGTWDHIVNQIGMFSYTGLNESHVRVLIDQYHIYLLKTGRISMSGLN 407
            .|..::..:::||..|||||:|:||..|.|...|.|||...|..|:.:.||||.||.||:.:.:|
  Rat   320 NIMLIKEKVKEKLRLLGTPGSWNHITRQSGTHGYLGLNYQQVEFLVKKKHIYLPKTSRINFTCIN 384

  Fly   408 KGNVEYVAKAIHAAV 422
            ..|::|:.::||.||
  Rat   385 SSNIDYITQSIHEAV 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Got1NP_725534.1 PTZ00376 21..423 CDD:240390 148/403 (37%)
Aminotran_1_2 49..418 CDD:278580 137/369 (37%)
Got1l1NP_001014025.2 AAT_I 5..399 CDD:418510 146/399 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336867
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1448
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104596at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11879
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.810

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