DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Got1 and got-2.2

DIOPT Version :9

Sequence 1:NP_725534.1 Gene:Got1 / 36782 FlyBaseID:FBgn0001124 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_741810.1 Gene:got-2.2 / 180897 WormBaseID:WBGene00015778 Length:414 Species:Caenorhabditis elegans


Alignment Length:397 Identity:190/397 - (47%)
Similarity:260/397 - (65%) Gaps:2/397 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEISIASDEQVNH 87
            |.::.|..||...:..:|:|||.||||.|:||.|||||.|.|.|:|||.|::.|..:.: ..::.
 Worm    16 SWWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEAERQVIA-ANLDK 79

  Fly    88 EYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFLHTQLNRNVVYYSNP 152
            ||..:.||..||..:.:|.||.:|..||..|.|..|:||||||||:.::||.......|:|...|
 Worm    80 EYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSEFLSKYAKTKVIYQPTP 144

  Fly   153 TWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGAVIILHACAHNPTGIDPTQE 217
            ||.||..||..|| ..||.|||:|::....|....|||:...|.|:.|:||||||||||:||:::
 Worm   145 TWGNHVPIFKFAG-VDVKQYRYYDKSTCGFDETGALADIAQIPEGSTILLHACAHNPTGVDPSRD 208

  Fly   218 QWTELADLMEKKKLFPLFDSAYQGFASGDPDRDAWAARYFVQRGFELFICQSFAKNFGLYCERTG 282
            ||.:::|:::|:.||..||.|||||||||.|.||:|.||||::|..:.:.||||||.|||.||.|
 Worm   209 QWKKISDIVKKRNLFVFFDMAYQGFASGDVDNDAFAVRYFVEQGHNIVLSQSFAKNMGLYGERVG 273

  Fly   283 NLAVVQKNGATKAAVHSQLTLLIRGQYSNPPAYGARIVSKVLNTPELRKEWMASIQAMSSRIREM 347
            ..:||..:....|.|.||:.:|||..|||||.:||||.|::|..|.|.|:|:..::.|:.||..|
 Worm   274 AFSVVTSDADEAARVASQVKILIRPLYSNPPVHGARIASRILADPALNKQWLGDVKLMADRIITM 338

  Fly   348 RTALRDKLVALGTPGTWDHIVNQIGMFSYTGLNESHVRVLIDQYHIYLLKTGRISMSGLNKGNVE 412
            ||.|:|.|...|:...|:||.||||||.:||:|...|..||.::.:||.|.||||::|::..||.
 Worm   339 RTTLKDLLAKEGSTRNWEHITNQIGMFCFTGINPQQVEKLIKEHSVYLTKDGRISVAGISSNNVA 403

  Fly   413 YVAKAIH 419
            |:|.|:|
 Worm   404 YLAHALH 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Got1NP_725534.1 PTZ00376 21..423 CDD:240390 190/397 (48%)
Aminotran_1_2 49..418 CDD:278580 177/368 (48%)
got-2.2NP_741810.1 AAT_I 1..414 CDD:302748 190/397 (48%)
Aminotran_1_2 42..409 CDD:278580 177/368 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62835
OrthoDB 1 1.010 - - D1104596at2759
OrthoFinder 1 1.000 - - FOG0000707
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100337
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2019
SonicParanoid 1 1.000 - - X428
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.860

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