DRSC/TRiP Functional Genomics Resources

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Protein Alignment Got1 and got-2.1

DIOPT Version :9

Sequence 1:NP_725534.1 Gene:Got1 / 36782 FlyBaseID:FBgn0001124 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_491413.2 Gene:got-2.1 / 172072 WormBaseID:WBGene00016652 Length:419 Species:Caenorhabditis elegans


Alignment Length:409 Identity:188/409 - (45%)
Similarity:273/409 - (66%) Gaps:10/409 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LSTMSI--------YADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKT 75
            :||.::        :.:||..||..:..:|:|||.|:||||:||.|||||.|.|.|:||..||:.
 Worm     9 MSTTTVTAQPVLPWFRNVPLAPADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVLRAVREA 73

  Fly    76 EISIASDEQVNHEYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFLHT 140
            |..|. |.:::.||..:||:..|...|.:|..|.:|..|::.|.|..|:||||||||:...|:..
 Worm    74 EQQII-DAKMDKEYSTITGVPEFAPLAAKLAFGDNSEVIRDGRVFTTQSISGTGALRIGGQFVEK 137

  Fly   141 QLNRNVVYYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGAVIILHAC 205
            .:....::|..|||.||..:|.::|. :::.|||::|.....|.:..|.|::..|.|:||:||||
 Worm   138 FIPSKTLFYPTPTWANHLPVFRNSGL-SIQPYRYYNQETLGFDVEGALEDISKMPEGSVILLHAC 201

  Fly   206 AHNPTGIDPTQEQWTELADLMEKKKLFPLFDSAYQGFASGDPDRDAWAARYFVQRGFELFICQSF 270
            ||||||:|||:|||.:|:.:::::|:.|.||.|||||||||.|.||:|.|:|:::|..:.:.|||
 Worm   202 AHNPTGVDPTKEQWKKLSQVLKERKILPFFDMAYQGFASGDVDDDAFALRHFIEQGHNVLVAQSF 266

  Fly   271 AKNFGLYCERTGNLAVVQKNGATKAAVHSQLTLLIRGQYSNPPAYGARIVSKVLNTPELRKEWMA 335
            |||.|||.||.|..::|..:......|.||:.::||...|.||.:||||.|::|:.|||:|.|:.
 Worm   267 AKNMGLYGERVGAFSIVCDSAEEAIRVGSQMRIIIRPMISMPPLHGARIASRILSNPELKKSWLE 331

  Fly   336 SIQAMSSRIREMRTALRDKLVALGTPGTWDHIVNQIGMFSYTGLNESHVRVLIDQYHIYLLKTGR 400
            .::.|:.||:.|||||:|.|.|.|:...||||.||||||.:||:||..|:.||.::.:||...||
 Worm   332 DVKLMADRIKSMRTALKDGLKAEGSTLNWDHITNQIGMFCFTGINEKQVQKLIKEHSVYLTNDGR 396

  Fly   401 ISMSGLNKGNVEYVAKAIH 419
            ||:||:|.|||.|:|||:|
 Worm   397 ISISGINTGNVAYLAKALH 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Got1NP_725534.1 PTZ00376 21..423 CDD:240390 187/407 (46%)
Aminotran_1_2 49..418 CDD:278580 174/368 (47%)
got-2.1NP_491413.2 AAT_I 9..419 CDD:302748 188/409 (46%)
Aminotran_1_2 47..414 CDD:278580 174/368 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1448
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62835
OrthoDB 1 1.010 - - D1104596at2759
OrthoFinder 1 1.000 - - FOG0000707
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100337
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X428
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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