DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhe and GID1A

DIOPT Version :10

Sequence 1:NP_523758.3 Gene:Jhe / 36780 FlyBaseID:FBgn0010052 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_187163.1 Gene:GID1A / 819674 AraportID:AT3G05120 Length:345 Species:Arabidopsis thaliana


Alignment Length:286 Identity:63/286 - (22%)
Similarity:95/286 - (33%) Gaps:90/286 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 LYLNVYRP------------EIRK----SALPVMVYIHGGGFFGGSAGPGV--TGPEYFMDSGEV 160
            |...||||            ::.|    ..:||:::.|||.|...||...:  |.....:...:.
plant    76 LLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKC 140

  Fly   161 ILVTMAYRLGPFG-FLSTQDAVMSGNFGLKDQNLALRWVQRNIRFFGGDPQRVTIF--GQSAGGV 222
            ::|::.||..|.. :....|          |..:||.||............:|.||  |.|:||.
plant   141 VVVSVNYRRAPENPYPCAYD----------DGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGN 195

  Fly   223 AAHMHLLSPRSHGLFHRVISMSGT--ANVPFAIAEQPLEQARL------------------LAEF 267
            .||...|.....|     |.:.|.  .|..|...|:...:..|                  |.|.
plant   196 IAHNVALRAGESG-----IDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEG 255

  Fly   268 AD---------VPDARNLSTVKLTKAL------------RRINATKLLNAGDGLKYWDVDHMT-- 309
            .|         .|..::|..|...|:|            :...|..|..||..:|...::..|  
plant   256 EDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVG 320

  Fly   310 --------NFRPVVEEGLEVDAFLNA 327
                    :|..|::   |:.||:||
plant   321 FYLLPNNNHFHNVMD---EISAFVNA 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JheNP_523758.3 alpha/beta hydrolases 38..527 CDD:473884 63/286 (22%)
GID1ANP_187163.1 Abhydrolase_3 109..322 CDD:400284 48/227 (21%)

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