DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhe and nlgn3b

DIOPT Version :9

Sequence 1:NP_001163166.1 Gene:Jhe / 36780 FlyBaseID:FBgn0010052 Length:579 Species:Drosophila melanogaster
Sequence 2:XP_005165239.1 Gene:nlgn3b / 567415 ZFINID:ZDB-GENE-060526-197 Length:846 Species:Danio rerio


Alignment Length:586 Identity:154/586 - (26%)
Similarity:253/586 - (43%) Gaps:108/586 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 EAFMGIPYALPPIGDLRFSNPKVMPKLLGMYDASAPKMDCIQ------KNYLLPTPVVYG----- 109
            :.::|:|||.||:|:.||..|.......|:.:|:.....|.|      .:.::|....|.     
Zfish    71 DQYLGVPYAAPPVGEKRFMPPDAPSAWSGVRNATRFPPVCPQTVRNAVPDIMMPVWATYNMDTVA 135

  Fly   110 ------DEDCLYLNVYRP------------------------EIRKSALPVMVYIHGGGFFGGSA 144
                  .|||||:|:|.|                        :.|....|||::||||.:..|:.
Zfish   136 TYLQEQSEDCLYMNIYVPTQSGTKRTGDMSADTERTEDDGLRDSRDDPRPVMLFIHGGSYMEGTG 200

  Fly   145 GPGVTGPEYFMDS------GEVILVTMAYRLGPFGFLSTQDAVMSGNFGLKDQNLALRWVQRNIR 203
            .        .||.      |.||::|:.||:|..|||||.|....||:||.||..||||:.:||.
Zfish   201 N--------IMDGSVLASYGNVIVITLNYRVGILGFLSTGDQAAKGNYGLLDQIQALRWINKNIG 257

  Fly   204 FFGGDPQRVTIFGQSAGGVAAHMHLLSPRSHGLFHRVISMSGTANVPFAIAEQPLEQARLLAE-- 266
            :|||||.|||:||...|.....:..||..|.|||||.|..||:|...:::..||::..|||||  
Zfish   258 YFGGDPGRVTVFGSGIGASCVSLLTLSHHSEGLFHRAIIQSGSALSSWSVNYQPVKYTRLLAERV 322

  Fly   267 FADVPDARNLSTVKLTKALRRINATKLLNAGDGLKYWDVDHMTNFRPVVEEGLEVDAFLNAHPMD 331
            ..:|.|.::|......::.|.:...::..|    ::    |:. |.||::..|..|     .|..
Zfish   323 GCNVLDTQDLVLCMQKRSYRELVEQEIQPA----RF----HVA-FGPVIDGDLIPD-----DPEV 373

  Fly   332 MLAQGMPTSIPLLLGTVPGEGAVRVVNILGNE---TLRQSFNLRFDELLQELLEFPASFSQDRRE 393
            ::.||...:..::||...|||...|..::..|   .....|:....:.:..|..:|     :.::
Zfish   374 LMEQGEFLNYDIMLGVNQGEGFRFVEGVVEPEEGGVSGSDFDFTVSDFVDSLYGYP-----EGKD 433

  Fly   394 KMMDLLVEVYFQGQHEVN-ELTVQGFMNLISDRGFKQPLYNT--IHKNVCHTPNPVYLYSFNY-- 453
            .:.:.:..:|.......| |...:..:.:.:|..:.:|...|  :|   ....:|.:.|:|.:  
Zfish   434 TLRETIKFMYTDWADRDNPETRRKTLVAMFTDHQWVEPAVVTADLH---ARYGSPTFFYAFYHHC 495

  Fly   454 QGPLSYASAYTSANVTGKYGVVHCDDLLYLFRSPL-----LFP-DFQRNSTEAKVIHSFVDYFVH 512
            |.|:....|.::          |.|:|.|:|..||     ||| :|.||......:  .:.|:.:
Zfish   496 QSPMKPPWADSA----------HGDELPYVFGVPLIGPTELFPCNFSRNDIMLSAV--VMTYWTN 548

  Fly   513 FAKFGKPRNSESLTPCSIEVLQSRPDGICDYHEFANAPDAYQ--GFEVHVASEFQTDRVNLWSHI 575
            |||.|.|..........|....:|.:.: .:.::......|.  |.:..|...::..:|..|.|:
Zfish   549 FAKTGDPNKPVPQDTKFIHTKANRFEEV-TWAKYGPHDQLYLHIGLKPRVRDHYRATKVAFWKHL 612

  Fly   576 L 576
            :
Zfish   613 V 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JheNP_001163166.1 COesterase 40..527 CDD:278561 146/533 (27%)
nlgn3bXP_005165239.1 COesterase 40..609 CDD:278561 152/580 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575299
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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