DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhe and LOC102548129

DIOPT Version :10

Sequence 1:NP_523758.3 Gene:Jhe / 36780 FlyBaseID:FBgn0010052 Length:579 Species:Drosophila melanogaster
Sequence 2:XP_008770776.1 Gene:LOC102548129 / 102548129 RGDID:7614959 Length:417 Species:Rattus norvegicus


Alignment Length:404 Identity:108/404 - (26%)
Similarity:170/404 - (42%) Gaps:50/404 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 MVYIHGGGFFGGSA----GPGVTGPEYFMDSGEVILVTMAYRLGPFGFLSTQDAVMSGNFGLKDQ 191
            |.:||||......|    |..:...|      :|:::.:.|.||..||.|:.|....||:|...|
  Rat     1 MTWIHGGALVMSMASIRDGSMLAAIE------DVVVINIQYHLGILGFFSSGDEQARGNWGYLVQ 59

  Fly   192 NLALRWVQRNIRFFGGDPQRVTIFGQSAGGVAAHMHLLSPRSHGLFHRVISMSGTANVPFAIAEQ 256
            ...|.|||:||..|||:|.||||||.||||.:...|::||.|.||||..|..||.|.:|..|:..
  Rat    60 VAVLHWVQQNIANFGGNPDRVTIFGGSAGGTSVSSHIVSPMSQGLFHGAIMESGVALLPGLISNT 124

  Fly   257 PLEQARLLAEFADVPDARNLSTVKLTKALRRINATKLLNAGDGLKYWDVDHMTNFRPVVEEGLEV 321
            |   ..:....|.:.....:.:..|.:.||..:..::|         .::.:....|.|.:|   
  Rat   125 P---EVVYITVATLSGCEAMDSETLVQCLRNKSEEEIL---------AINKVFTMIPAVVDG--- 174

  Fly   322 DAFLNAHPMDMLAQGMPTSIPLLLGTVPGEGAVRVVNILGN-----ETLRQSFNLRFDELLQELL 381
             .||..||..:|.......:|.::|....|.......|:|:     |..|::.....:.:..:::
  Rat   175 -EFLPNHPQQLLTPVDFHPVPSIIGVNNDEYGWLFPMIVGSDQTIKEITRENLQAVLNNITTQMM 238

  Fly   382 EFPASFSQDRREKMMDLLVEVYFQGQHEVNELTVQGFMNLISDRGFKQPLYNTIHKNVCHTPNPV 446
            ..|         :..|||:|.|.....:...|..| |..::.|..|..|.....|....|.  .|
  Rat   239 LPP---------ECSDLLMEEYIGDIEDAQTLQAQ-FREMMGDFMFIIPALQVAHFQSAHA--SV 291

  Fly   447 YLYSFNYQGPLSYASAYTSANVTGKYGVVHCDDLLYLFRSPLLFPDFQRNSTEAKVIHSFVDYFV 511
            |.|.|:.:.  :|.......:|...:|    |::.::|.:......|...:.|..:....:.|:.
  Rat   292 YFYEFHLEA--NYLKNVRPPHVKADHG----DEVPFVFGNSFWGMKFDLTAEEKLLSRRMMKYWT 350

  Fly   512 HFAKFGKPRNSESL 525
            :||:.|.| ||..|
  Rat   351 NFARQGNP-NSRGL 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JheNP_523758.3 alpha/beta hydrolases 38..527 CDD:473884 108/404 (27%)
LOC102548129XP_008770776.1 COesterase <1..396 CDD:395084 108/404 (27%)

Return to query results.
Submit another query.