DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhedup and CXE12

DIOPT Version :10

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_190438.1 Gene:CXE12 / 824030 AraportID:AT3G48690 Length:324 Species:Arabidopsis thaliana


Alignment Length:241 Identity:65/241 - (26%)
Similarity:97/241 - (40%) Gaps:69/241 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LMPGYQSGEFEAFMGIPFAQPPVGPLRLKNPVPNEPWEGVLDAGAAKDSCIQRSYFAKEWGLMGV 98
            |:..|:||..|..||           ....|..:||..||:    :||.            :...
plant    12 LLKIYKSGRIERLMG-----------EATVPPSSEPQNGVV----SKDV------------VYSA 49

  Fly    99 EDCLYLNVYRPKNRA---EDKLPVMVYIHGGGF-----FSGSAHPMASGPEYLMDTNKVVMVTMN 155
            ::.|.:.:|.|:..|   :.|||::||.|||||     ||.:.|...:..   :..:..|.|:::
plant    50 DNNLSVRIYLPEKAAAETDSKLPLLVYFHGGGFIIETAFSPTYHTFLTTS---VSASNCVAVSVD 111

  Fly   156 YRLGPFGFLSTGDEHMPGNFGFKDQRLALQWIQKHIATFG--------GDPKKVTVLGHSAGGIS 212
            ||..|        || |.:..|.|...||:|:..||...|        .|..:|.:.|.|||...
plant   112 YRRAP--------EH-PISVPFDDSWTALKWVFTHITGSGQEDWLNKHADFSRVFLSGDSAGANI 167

  Fly   213 AHLHM--------ISPNSKGLFQNSMSLTGTMFLSAMKILKDPLSQ 250
            .| ||        :||   ||  |...::|.:.|......|.|:.:
plant   168 VH-HMAMRAAKEKLSP---GL--NDTGISGIILLHPYFWSKTPIDE 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 alpha/beta hydrolases 31..508 CDD:473884 65/241 (27%)
CXE12NP_190438.1 LpqC 28..>81 CDD:442732 18/68 (26%)
Abhydrolase_3 74..282 CDD:400284 44/152 (29%)

Return to query results.
Submit another query.