DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhedup and tg

DIOPT Version :10

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_001316794.1 Gene:tg / 567631 ZFINID:ZDB-GENE-030519-1 Length:2733 Species:Danio rerio


Alignment Length:548 Identity:151/548 - (27%)
Similarity:228/548 - (41%) Gaps:127/548 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GVLL-FVAVAVGDSLDVCLEDMGCMRGTLM--------PGYQSGEFEAFMGIPFAQPPVGPLRLK 62
            ||.| |.:|::.|            .|||:        .|..|.....|:|:|:|:||:|.||..
Zfish  2158 GVQLEFTSVSIPD------------HGTLLGESEVKPITGSDSKRVTYFLGVPYARPPIGDLRFS 2210

  Fly    63 NPVPNEPWEGVLDAGAAKDSCIQRSYFAKEWGLMGVEDCLYLNVYRPKNRAEDKLPVMVYIHGGG 127
            .|.|.: |.|..:|...:.||:|.......   ...||||||||:...:.|:: .||:|:.|..|
Zfish  2211 PPQPAD-WTGTWNATFFRSSCLQPGDLTDS---SSSEDCLYLNVFVASSVAKN-APVLVFFHNSG 2270

  Fly   128 --FFSGSAHPMASGPEYLMDTNKVVMVTMNYRLGPFGFLSTGDEHMPGNFGFKDQRLALQWIQKH 190
              ...||         ||.....:::||.::|:..|||||.|...:|||:|.:||..||.|:||:
Zfish  2271 SDLLDGS---------YLAAVGNIIVVTASFRMAAFGFLSAGSSALPGNYGLQDQAAALGWVQKN 2326

  Fly   191 IATFGGDPKKVTVLGHSAGGISAHLHMISPNSKGLFQNSMSLTGTMFLSAMKILKDPLSQAR--R 253
            ||.|||||.||||.....|...|.||:.||::..||..::.:.|::|..|: ::....:||:  .
Zfish  2327 IALFGGDPTKVTVGAERNGADIASLHLTSPSASSLFSRALLMGGSVFSPAV-VMSSSKAQAQTSS 2390

  Fly   254 LGKELAIDQAESLSSQDLAEALR-------NVCPKKLLVSVDSLKVWDNMPHLTTLPVLEAPSPD 311
            |.:||   ..::.....|.:.||       |....|||.....|:.|             :|..|
Zfish  2391 LAREL---DCQAADPSQLLDCLRSKPAHSINAAQTKLLAVSGPLQAW-------------SPVVD 2439

  Fly   312 AFLV-EDPLDAHRAGRINQMPWILSLSSRAGEGSLFIMRA-----FINPKLRAEFNENFLEHMAL 370
            ..:| |.|..|.::||.::...:|..|...|    .|.||     |...:.||:....|   .|.
Zfish  2440 GNVVREMPSVALQSGRFHKAEILLGSSFEDG----LISRAKNIKNFEQLQGRADSKTAF---YAA 2497

  Fly   371 LLNLPEGTPVQMVSEILDAYDFKGDSLNNDTMLKLAEISGDFNFYYPIYE--TISSYVTYANLEE 433
            |.|                 ...||..|       |.:.....::|.:..  |.|.|..::...|
Zfish  2498 LSN-----------------SLGGDDAN-------AFVKEAATWFYSLQHSPTPSGYNVFSRALE 2538

  Fly   434 N---PLFIYIFEFAGLNSITKFFAGTTDDYGLGAVHMDD--GLHTIRIPVSFD------------ 481
            |   .|||    ......:.:|:|..|.. |:...|:.:  ..:::.:.|..|            
Zfish  2539 NATRDLFI----ICPTVDMAEFWAANTQT-GVYMYHLPENAAYNSVDLSVPMDVQYLFGVPLAAE 2598

  Fly   482 --DFPKDSEDAKVIQRMSSLMTDFAKTG 507
              |.....|....:|.| :.|.:|.|:|
Zfish  2599 QRDLFSYKEKTFTLQIM-NYMANFIKSG 2625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 alpha/beta hydrolases 31..508 CDD:473884 145/523 (28%)
tgNP_001316794.1 Thyroglobulin_1 40..98 CDD:459665
Thyroglobulin_1 102..161 CDD:459665
TY 165..249 CDD:469630
TY 301..358 CDD:238114
TY <594..639 CDD:238114
Thyroglobulin_1 643..705 CDD:459665
TY 990..1047 CDD:238114
TY 1133..1194 CDD:469630
Ephrin_rec_like 1425..1470 CDD:429604
COesterase 2172..2678 CDD:395084 145/522 (28%)
Blue background indicates that the domain is not in the aligned region.

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