DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhedup and nlgn3b

DIOPT Version :10

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_005165239.1 Gene:nlgn3b / 567415 ZFINID:ZDB-GENE-060526-197 Length:846 Species:Danio rerio


Alignment Length:585 Identity:148/585 - (25%)
Similarity:235/585 - (40%) Gaps:108/585 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GEFEAFMGIPFAQPPVGPLRLKNPVPNEPWEGVLDAGAAKDSCIQR------SYFAKEWGLMGV- 98
            |..:.::|:|:|.||||..|...|.....|.||.:|......|.|.      ......|....: 
Zfish    68 GPVDQYLGVPYAAPPVGEKRFMPPDAPSAWSGVRNATRFPPVCPQTVRNAVPDIMMPVWATYNMD 132

  Fly    99 ----------EDCLYLNVYRP-----------------------KNRAEDKLPVMVYIHGGGFFS 130
                      |||||:|:|.|                       ::..:|..|||::||||.:..
Zfish   133 TVATYLQEQSEDCLYMNIYVPTQSGTKRTGDMSADTERTEDDGLRDSRDDPRPVMLFIHGGSYME 197

  Fly   131 GSAHPMASGPEYLMDTNKVVMVTMNYRLGPFGFLSTGDEHMPGNFGFKDQRLALQWIQKHIATFG 195
            |:.:.|..  ..|.....|:::|:|||:|..|||||||:...||:|..||..||:||.|:|..||
Zfish   198 GTGNIMDG--SVLASYGNVIVITLNYRVGILGFLSTGDQAAKGNYGLLDQIQALRWINKNIGYFG 260

  Fly   196 GDPKKVTVLGHSAGGISAHLHMISPNSKGLFQNSMSLTGTMFLSAMKILKDPLSQARRLGKELAI 260
            |||.:|||.|...|.....|..:|.:|:|||..::..:|:. ||:..:...|:...|.|.:.:. 
Zfish   261 GDPGRVTVFGSGIGASCVSLLTLSHHSEGLFHRAIIQSGSA-LSSWSVNYQPVKYTRLLAERVG- 323

  Fly   261 DQAESLSSQDLAEALRNVCPKKLLVSVDSLKVWDNMP---HLTTLPVLEAPSPDAFLVEDPLDAH 322
              ...|.:|||.     :|.:|.  |...|...:..|   |:...||::..    .:.:||....
Zfish   324 --CNVLDTQDLV-----LCMQKR--SYRELVEQEIQPARFHVAFGPVIDGD----LIPDDPEVLM 375

  Fly   323 RAGRINQMPWILSLSSRAGEGSLFIMRAFINPK----LRAEFNENFLEHMALLLNLPEGTPVQMV 383
            ..|..  :.:.:.|....|||..|: ...:.|:    ..::|:....:.:..|...|||... :.
Zfish   376 EQGEF--LNYDIMLGVNQGEGFRFV-EGVVEPEEGGVSGSDFDFTVSDFVDSLYGYPEGKDT-LR 436

  Fly   384 SEILDAYDFKGDSLNNDTMLK-LAEISGDFNFYYPIYETISSYVTYANLEENPLFIYIFEFAGLN 447
            ..|...|....|..|.:|..| |..:..|..:..|...|...:..|.    :|.|.|.|.....:
Zfish   437 ETIKFMYTDWADRDNPETRRKTLVAMFTDHQWVEPAVVTADLHARYG----SPTFFYAFYHHCQS 497

  Fly   448 SITKFFAGTTDDYGLGAVHMDDGLHTIRIPV--SFDDFPKD--SEDAKVIQRMSSLMTDFAKTG- 507
            .:...:|        .:.|.|:..:...:|:  ..:.||.:  ..|..:...:.:..|:||||| 
Zfish   498 PMKPPWA--------DSAHGDELPYVFGVPLIGPTELFPCNFSRNDIMLSAVVMTYWTNFAKTGD 554

  Fly   508 ----------VFHEESICKVSDFKEQGMCNYLHFGGNKEKYLE-----DIRNSITLTAFPIWKKL 557
                      ..|    .|.:.|:|   ..:..:|.:.:.||.     .:|:....|....||.|
Zfish   555 PNKPVPQDTKFIH----TKANRFEE---VTWAKYGPHDQLYLHIGLKPRVRDHYRATKVAFWKHL 612

  Fly   558  557
            Zfish   613  612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 alpha/beta hydrolases 31..508 CDD:473884 136/529 (26%)
nlgn3bXP_005165239.1 COesterase 45..609 CDD:395084 145/580 (25%)
Herpes_BLLF1 <753..>843 CDD:282904
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.