DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhedup and Nrt

DIOPT Version :10

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_476798.1 Gene:Nrt / 39873 FlyBaseID:FBgn0004108 Length:846 Species:Drosophila melanogaster


Alignment Length:457 Identity:128/457 - (28%)
Similarity:190/457 - (41%) Gaps:89/457 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FGVLLFVAV--AVGDSLD-------------VCLEDMGCMRGTLMPGYQSGEFEAFMGIPFAQPP 55
            ||:||||.:  .:|..|.             ..:...||  |.:....:.|.| ||.|||:|:||
  Fly   329 FGILLFVLLLGVIGYVLTHETLTSPPLREGRYIMAVTGC--GPVEGVKEDGAF-AFRGIPYAKPP 390

  Fly    56 VGPLRLKNPVP-----NEPWEGVLDAGAAKDSCIQRSYFAKEWGLMGVEDCLYLNVYRPKNRAED 115
            |..||.| |..     |..|...|....:...|.||   ......:|.||||||:|..|..|..:
  Fly   391 VDRLRWK-PAELIDDINMCWNDTLQTHNSSVVCTQR---LGNGTTVGDEDCLYLDVVTPHVRYNN 451

  Fly   116 KLPVMVYIHGGGFFSGSAHPMASGPEYLMDTNKVVMVTMNYRLGPFGFLS----TGDEHMP--GN 174
            .|||:|.| |....:|.:..:.........::.|:.|..|:|||.||||:    |.:.|.|  ||
  Fly   452 PLPVVVLI-GAESLAGPSPGILRPSARYSRSHDVIFVRPNFRLGVFGFLALDALTKEAHPPTSGN 515

  Fly   175 FGFKDQRLALQWIQKHIATFGGDPKKVTVLGHSAGGISAHLHMISPNSKGLFQNSMSLTGTMFLS 239
            :...|....|.||:.:|..|||||:.||:|||.||.....|.:.|...|||:..:.:.:|:..|.
  Fly   516 YALTDIIAVLNWIKLNIVHFGGDPQSVTLLGHRAGATLVTLLVNSQKVKGLYTRAWASSGSAILP 580

  Fly   240 AMKILKDPLSQARRLGKELAIDQAESLSSQDLAEALRNVCPKKLLVSVDSLKVWDNMPHLTTLPV 304
            .     .|||::.:..::|    ..:|...|: :.||....::|..:...  .|.:.|       
  Fly   581 G-----KPLSESGKQNEQL----MATLECADI-QCLREASSERLWAATPD--TWLHFP------- 626

  Fly   305 LEAPSP---------------DAFLV-EDPLDAHRAGRINQMPWILSLSSRAGEGSLFIMRAFIN 353
            ::.|.|               |..:| |.|.|..:..:.|..| :|.:.:.|.|..        .
  Fly   627 VDLPQPQEANASGSRHEWLVLDGDVVFEHPSDTWKREQANDKP-VLVMGATAHEAH--------T 682

  Fly   354 PKLRAEFNENFL--EHMALLLNLPEGTPVQMVSEILDAYDFKGDSLNNDTMLKLAEISGDFNFYY 416
            .||| |.:.|:.  |..|.|.|...|. :.:..|:::.|       |..:...|..|..|.....
  Fly   683 EKLR-ELHANWTREEVRAYLENSQIGA-LGLTDEVIEKY-------NASSYASLVSIISDIRSVC 738

  Fly   417 PI 418
            |:
  Fly   739 PL 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 alpha/beta hydrolases 31..508 CDD:473884 118/417 (28%)
NrtNP_476798.1 PTZ00121 <3..>222 CDD:173412
alpha/beta hydrolases 362..832 CDD:473884 120/424 (28%)
Blue background indicates that the domain is not in the aligned region.

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