DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhedup and Gli

DIOPT Version :10

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster


Alignment Length:544 Identity:158/544 - (29%)
Similarity:247/544 - (45%) Gaps:118/544 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GEFEAFMGIPFAQPPVGPLRLKNPVPNEPWE--GVLDAGAAKDSCIQR-SYFAKEWGLMGV-EDC 101
            ||...|:|||:|.||....|.|.|..:..|:  ..:|.|.|   |.|. .|.....|:|.: |||
  Fly   173 GECSVFLGIPYALPPTFEGRFKPPRVHRGWQLLQAVDFGPA---CPQPVRYTGATKGIMDMDEDC 234

  Fly   102 LYLNVYRPKNRA--EDKLPVMVYIHGGGFFSGSA-----HPMASGPEYLMDTNKVVMVTMNYRLG 159
            ||||||.||..|  ..|.|||||||||.|..|::     |.:||..:       ||:||:|||||
  Fly   235 LYLNVYSPKTGAGVAQKYPVMVYIHGGEFIRGASNLFQGHILASFYD-------VVVVTLNYRLG 292

  Fly   160 PFGFLSTGDEHMPGNFGFKDQRLALQWIQKHIATFGGDPKKVTVLGHSAGGISAHLHMISPNSKG 224
            ..||||||||:.|||:|..||.:||:|:..:|..|.||...:|:.|..|||.||.|.|::|.::.
  Fly   293 ALGFLSTGDENSPGNYGILDQAMALRWVYDNIEFFNGDRNSITLFGPGAGGASAGLLMVAPQTRN 357

  Fly   225 LFQNSMSLTGTMFLSAMKILKDPL---SQARRLGKEL--AIDQAESLSSQDLAEALRNVCPKKLL 284
            :.:..::.:|:. |:...:::|..   :.:|.||:.|  :|:     ||..|...||.   .:..
  Fly   358 IVRRVIAQSGSA-LADWALIQDKYRAQNTSRVLGQLLGCSIE-----SSWKLVNCLRT---GRSF 413

  Fly   285 VSVDSLKVWDNMPHLTTLPVLE----APSPD----------AFLVEDPLDAHRAGRINQ-MPWIL 334
            ..:.:.:....:......|||:    .|..|          .||.:.|....|||:.|: :.::.
  Fly   414 YELGNAEFSPQVGSFPWGPVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMT 478

  Fly   335 SLSSRAGEGSLFI-MRAFINPKLRAE---FNENFLEHM---ALLLNLPEGTPVQMVSEILDAYDF 392
            .::::  |.:.|: ....::|....:   |::...||:   ...|| |.|    :...|...|.|
  Fly   479 GVTTQ--EAAFFVAQNESLSPYYELDGRFFDQKIREHVFRYNYTLN-PNG----VYEAIKYIYTF 536

  Fly   393 KGDSLNNDTMLKLAEISGDFNFYY--PIYETISSYVTYANLEEN-PLFIYIFE--FAGLN----- 447
            ..|. ||:|:::...|:...:.||  |:.:.:.     ..||:. |:::|:..  ...||     
  Fly   537 WPDP-NNNTIIRDQYINMLSDLYYRAPVDQMVK-----LMLEQKVPVYMYVLNTTVEALNLPQWR 595

  Fly   448 ----SITKFFAGTTDDYGLGAVHMDDGLHTIRIPVSFDDFPKDSEDAKVIQRMSSLMTDFAKTGV 508
                .|.::|.       .||..||.           :.|||...    :||  ::.||..:   
  Fly   596 KYPHDIERYFL-------TGAPFMDT-----------EFFPKKEH----LQR--NMWTDNDR--- 633

  Fly   509 FHEESICKVSDFKEQGMCNYLHFG 532
                   .:|.|..|...|:..:|
  Fly   634 -------NMSHFFMQTYTNFARYG 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 alpha/beta hydrolases 31..508 CDD:473884 153/518 (30%)
GliNP_476602.1 COesterase 137..695 CDD:395084 158/544 (29%)
PRK13335 818..>918 CDD:139494
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.