DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhedup and Gli

DIOPT Version :9

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster


Alignment Length:544 Identity:158/544 - (29%)
Similarity:247/544 - (45%) Gaps:118/544 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GEFEAFMGIPFAQPPVGPLRLKNPVPNEPWE--GVLDAGAAKDSCIQR-SYFAKEWGLMGV-EDC 101
            ||...|:|||:|.||....|.|.|..:..|:  ..:|.|.|   |.|. .|.....|:|.: |||
  Fly   173 GECSVFLGIPYALPPTFEGRFKPPRVHRGWQLLQAVDFGPA---CPQPVRYTGATKGIMDMDEDC 234

  Fly   102 LYLNVYRPKNRA--EDKLPVMVYIHGGGFFSGSA-----HPMASGPEYLMDTNKVVMVTMNYRLG 159
            ||||||.||..|  ..|.|||||||||.|..|::     |.:||..:       ||:||:|||||
  Fly   235 LYLNVYSPKTGAGVAQKYPVMVYIHGGEFIRGASNLFQGHILASFYD-------VVVVTLNYRLG 292

  Fly   160 PFGFLSTGDEHMPGNFGFKDQRLALQWIQKHIATFGGDPKKVTVLGHSAGGISAHLHMISPNSKG 224
            ..||||||||:.|||:|..||.:||:|:..:|..|.||...:|:.|..|||.||.|.|::|.::.
  Fly   293 ALGFLSTGDENSPGNYGILDQAMALRWVYDNIEFFNGDRNSITLFGPGAGGASAGLLMVAPQTRN 357

  Fly   225 LFQNSMSLTGTMFLSAMKILKDPL---SQARRLGKEL--AIDQAESLSSQDLAEALRNVCPKKLL 284
            :.:..::.:|:. |:...:::|..   :.:|.||:.|  :|:     ||..|...||.   .:..
  Fly   358 IVRRVIAQSGSA-LADWALIQDKYRAQNTSRVLGQLLGCSIE-----SSWKLVNCLRT---GRSF 413

  Fly   285 VSVDSLKVWDNMPHLTTLPVLE----APSPD----------AFLVEDPLDAHRAGRINQ-MPWIL 334
            ..:.:.:....:......|||:    .|..|          .||.:.|....|||:.|: :.::.
  Fly   414 YELGNAEFSPQVGSFPWGPVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMT 478

  Fly   335 SLSSRAGEGSLFI-MRAFINPKLRAE---FNENFLEHM---ALLLNLPEGTPVQMVSEILDAYDF 392
            .::::  |.:.|: ....::|....:   |::...||:   ...|| |.|    :...|...|.|
  Fly   479 GVTTQ--EAAFFVAQNESLSPYYELDGRFFDQKIREHVFRYNYTLN-PNG----VYEAIKYIYTF 536

  Fly   393 KGDSLNNDTMLKLAEISGDFNFYY--PIYETISSYVTYANLEEN-PLFIYIFE--FAGLN----- 447
            ..|. ||:|:::...|:...:.||  |:.:.:.     ..||:. |:::|:..  ...||     
  Fly   537 WPDP-NNNTIIRDQYINMLSDLYYRAPVDQMVK-----LMLEQKVPVYMYVLNTTVEALNLPQWR 595

  Fly   448 ----SITKFFAGTTDDYGLGAVHMDDGLHTIRIPVSFDDFPKDSEDAKVIQRMSSLMTDFAKTGV 508
                .|.::|.       .||..||.           :.|||...    :||  ::.||..:   
  Fly   596 KYPHDIERYFL-------TGAPFMDT-----------EFFPKKEH----LQR--NMWTDNDR--- 633

  Fly   509 FHEESICKVSDFKEQGMCNYLHFG 532
                   .:|.|..|...|:..:|
  Fly   634 -------NMSHFFMQTYTNFARYG 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 COesterase 31..508 CDD:278561 153/518 (30%)
Aes <106..>210 CDD:223730 53/110 (48%)
GliNP_476602.1 COesterase 134..695 CDD:278561 158/544 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440382
Domainoid 1 1.000 98 1.000 Domainoid score I1867
eggNOG 1 0.900 - - E2759_KOG1516
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46967
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.740

Return to query results.
Submit another query.