DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhedup and Nlg2

DIOPT Version :9

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_001245916.1 Gene:Nlg2 / 33962 FlyBaseID:FBgn0031866 Length:1248 Species:Drosophila melanogaster


Alignment Length:558 Identity:152/558 - (27%)
Similarity:236/558 - (42%) Gaps:133/558 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GCMRGTLMPGYQSGEFEAFMGIPFAQPPVGPLRLKNPVPNEPWEGVLDAGAAKDSC--------- 83
            |.:||.::  ..|...|||:|||:|.||||.||...|:....|:.|..|......|         
  Fly   190 GLLRGIVV--RSSPLVEAFLGIPYASPPVGSLRFMPPITPSTWKTVRSADRFSPVCPQNIPIPPN 252

  Fly    84 -------IQRSYFAKEWGLMGV-----EDCLYLNVY------RPKNRAED-------KLPVMVYI 123
                   :.|:..|:...|:.:     |||||||:|      |.:...:|       ||..:|:|
  Fly   253 GPEALLEVPRARLAQLRRLLPLLKNQSEDCLYLNIYVPYETRRQRRNTDDTTGEPKTKLSTVVFI 317

  Fly   124 HGGGFFSGSAHPMASGPEYLMDTNKVVMVTMNYRLGPFGFLST-GDEHMPGNFGFKDQRLALQWI 187
            ||..:...|.:|. .|.|.....| |::||:|:|||.||||.| |.|...||||..|....|.|:
  Fly   318 HGESYDWNSGNPY-DGSELAAHGN-VIVVTINFRLGIFGFLKTGGKESAQGNFGLMDLVAGLHWL 380

  Fly   188 QKHIATFGGDPKKVTVLGHSAGGISAHLHMISPNSKGLFQNSMSLTGTMFLSAMKILKDPLSQAR 252
            ::::..|||||:.:|:||:..|.:.|::.::||.:..|.|.::.::|:. ||...|.|:||...|
  Fly   381 KENLPAFGGDPQSITLLGYGTGAVLANILVVSPVASDLIQRTVLVSGSA-LSPWAIQKNPLFVKR 444

  Fly   253 RL-------GKELAIDQAESLSSQDLAEALR-NVCPKKLLVS----VDSLKVWDNMPHL--TTLP 303
            |:       |..|..|.|..|.::.:||.|. .|...:.||.    ||...:......|  ||||
  Fly   445 RVAEQTGCHGDMLYDDLAPCLRTKSVAELLAVKVDHPRFLVGFAPFVDGTVISPGANPLGSTTLP 509

  Fly   304 VLEA------------PSPDAFLVEDPLDAHRAGRINQMPWILSLSSRAGEGSL------FIMRA 350
            :..|            |..|.......::::           |.||::..|...      .|:|.
  Fly   510 LGSAIVSTSGIEYANFPKRDLIFCLTSVESY-----------LDLSAQDLEFGFNETRRDRILRT 563

  Fly   351 FINPKLRAEFNENFLEHMALLLNLPEGTP-VQMVSEILDAYD----FKGDSLNNDTMLKLAEI-- 408
            |:........||.|    |:|.|  |.|. .:.:...|.:.|    |..|......::||..:  
  Fly   564 FVRNNFHYHLNEIF----AVLKN--EYTDWEKAIRNPLSSRDATLQFLSDGHTASPLIKLGYMHS 622

  Fly   409 --SGDFNFYYPIYETISSYVTYANLEENPLFIYIFEFAGLNSITKFFAGTTDDYGLGAVHMDDGL 471
              .|...|.:..::||.        ||.|                        ...|:|..:|..
  Fly   623 LRGGRAYFLHFKHKTIE--------EEYP------------------------QRSGSVRGEDVP 655

  Fly   472 HTIRIPVSFDDFPKD--SEDAKVIQRMSSLMTDFAKTG 507
            ..:.:|:| ..||.:  :::.::.:.|...:::|||||
  Fly   656 FWLGLPMS-PLFPHNYTTQERQIGRLMLRYLSNFAKTG 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 COesterase 31..508 CDD:278561 151/555 (27%)
Aes <106..>210 CDD:223730 43/117 (37%)
Nlg2NP_001245916.1 COesterase 182..712 CDD:278561 152/558 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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