DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhedup and SPOM_SPAPB1A11.02

DIOPT Version :10

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_593998.1 Gene:SPOM_SPAPB1A11.02 / 2543389 PomBaseID:SPAPB1A11.02 Length:339 Species:Schizosaccharomyces pombe


Alignment Length:129 Identity:33/129 - (25%)
Similarity:53/129 - (41%) Gaps:17/129 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 VYRPKNRAEDKLPVMVYIHGGGFFSGSAHPMASGPEYLMDTNKVVMVTMNYRLGPFGFLSTGDEH 170
            |:.|.:...|...:||:.|..|:.........|..:.|......|.|:::|||.|       :..
pombe    79 VFTPVSVPADYRSLMVFYHSSGWCMRGVRDDDSLFKILTPKFGCVCVSVDYRLAP-------ESK 136

  Fly   171 MPGNFGFKDQRLALQWIQKHIATFGGDPKKVTVL-GHSAGG----ISAHL---HMISPNSKGLF 226
            .|  ....|...:.:|:..:|...|.:||:...| |.||||    :.:|:   ..|.|...||:
pombe   137 FP--VAHNDAIDSFKWVASNIEKLGANPKRGFFLGGASAGGNFVSVLSHIARDEKIKPELTGLW 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 alpha/beta hydrolases 31..508 CDD:473884 33/129 (26%)
SPOM_SPAPB1A11.02NP_593998.1 Abhydrolase_3 93..307 CDD:400284 30/115 (26%)

Return to query results.
Submit another query.