DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhedup and glit-1

DIOPT Version :10

Sequence 1:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_508807.1 Gene:glit-1 / 180747 WormBaseID:WBGene00018878 Length:730 Species:Caenorhabditis elegans


Alignment Length:527 Identity:143/527 - (27%)
Similarity:241/527 - (45%) Gaps:135/527 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 FMGIPFAQPPVGPLRLKNPVPNEPWEGV-------LDAGAAKDSCIQRS---YFAKEWGLMGVED 100
            |:|:|:|:||....|.|.|.....:.|.       ..|..|:|  :::|   :....:..|..||
 Worm   109 FLGVPYAEPPTSQRRFKPPQQLTVFPGKQPYLAFNYAASCAQD--VEKSPSPFVDHPYPFMVDED 171

  Fly   101 CLYLNVYRP---KNRAEDKLPVMVYIHGGGFFSGSAHPMASGPEYLMDTNKVVMVTMNYRLGPFG 162
            |||||::.|   || |:...||:|:.|||.|.:|||:   ..|.:.:.:..:|:||:|||||.||
 Worm   172 CLYLNIFSPDISKN-AQTTYPVIVFFHGGNFQTGSAN---EWPAHGLASRGMVVVTVNYRLGAFG 232

  Fly   163 FLSTGDEHMPGNFGFKDQRLALQWIQKHIATFGGDPKKVTVLGHSAGGISAHLHMISPNSKGLFQ 227
            |:|.||.. .||:|.:||||||::::.:|.||||||:.|||:||.||..|...||.||.|:.||:
 Worm   233 FMSMGDSE-TGNYGLQDQRLALEFVKNNIVTFGGDPQAVTVVGHDAGAASIGFHMQSPYSRHLFR 296

  Fly   228 NSMSLTGTMFLSAMKILKDPL--SQARRLGKELAIDQAE---------SLSSQDLAEALRNVCPK 281
            ::.:::|........|.|..|  :...:||:.....||.         :.|:.|:.:|.||: |.
 Worm   297 SAATMSGAEVSYHSYIGKTALAFNNTMKLGRYAGCTQAVAQHRWDCILTRSTGDIIDATRNI-PI 360

  Fly   282 K-----LLVSVDSLKVWDNMPHLTTLPVLEAPSPDAFLVEDPLDAHRAGRINQMPWILSLSSRAG 341
            :     .:.:||. |.....| |.||  :.|||.:..:            ::.:|.::.::::.|
 Worm   361 EYNRYLFMPTVDG-KYLPGNP-LWTL--VNAPSGETSI------------MSPVPMLIGMNAQDG 409

  Fly   342 EGSLFIMRAFINPKLRAEFNE-NFLEHMALLLNLPEGTPVQMVSEILDAYDFKGDSLNNDTMLKL 405
            .      ...:..:...||:: |.::|                 |.|.:|..:....:|.:|.: 
 Worm   410 S------EVVLEDRRLGEFSQFNDVDH-----------------EYLKSYSLEYCYRHNYSMNR- 450

  Fly   406 AEISGDFNFYYPIYETISSYVTYAN------LEENPLFIYIFEFAGLNSITKFFAGTTDDYGLGA 464
             |.:.|        ..:|.|..:.:      ::||  ||   :||            ||.|....
 Worm   451 -EATAD--------AILSKYTFWPDRAAAWAIKEN--FI---QFA------------TDAYYTAP 489

  Fly   465 VHMDDGLHTIRIPVSFDDFPKDSEDAKVIQRMSSLMTDFAKTGVFHEESICKVSDFKEQGMCN-- 527
            :.:...||:             |..::|.|.:::.  :|::    ...::..:.|:  .|:|.  
 Worm   490 MQLSSHLHS-------------SSGSRVFQYVNNY--NFSR----QHPNLLFIPDW--MGVCRDC 533

  Fly   528 --YLHFG 532
              ||.||
 Worm   534 DLYLMFG 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhedupNP_611085.2 alpha/beta hydrolases 31..508 CDD:473884 136/497 (27%)
glit-1NP_508807.1 alpha/beta hydrolases 98..629 CDD:473884 143/527 (27%)

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